RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	FOXL1	Q12952	345 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	C10orf113	Q5VZT2	155 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	FBXL15	Q9H469	300 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	CDC42EP3	Q9UKI2	254 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001		A0A0G2JNJ9	132 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	TIMM23B	Q5SRD1	257 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	GDF5OS	Q5U4N7	250 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	ZNF714	Q96N38	554 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	CTSZ	Q9UBR2	303 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001		Q9UFV3	132 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	FAM90A27P	A6NNH2	459 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	BMPR1B	O00238	502 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	C8orf88	P0DMB2	117 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	TMEM11	P17152	192 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	LCN2	P80188	198 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	SPATA45	Q537H7	98 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	C17orf77	Q96MU5	243 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	NEU1	Q99519	415 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	DNAJC4	Q9NNZ3	241 aa		11.96	□□□□□ -0.49
PRPF8-216	ENST00000577001	hADV38S2	A0JD32	116 aa		11.96	□□□□□ -0.5
PRPF8-216	ENST00000577001	NUTF2	P61970	127 aa	Known RBP	11.96	□□□□□ -0.5
PRPF8-216	ENST00000577001	PRCD	Q00LT1	54 aa		11.96	□□□□□ -0.5
PRPF8-216	ENST00000577001	ADIPOQ	Q15848	244 aa		11.96	□□□□□ -0.5
PRPF8-216	ENST00000577001	PNKD	Q8N490	385 aa		11.96	□□□□□ -0.5
PRPF8-216	ENST00000577001	POLQ	O75417	2590 aa		11.96	□□□□□ -0.5
PRPF8-216	ENST00000577001	MPDU1	O75352	247 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	LHB	P01229	141 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	TPTE2P1	Q5T6R2	138 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	C1orf185	Q5T7R7	199 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	ZNF788	Q6ZQV5	615 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	SLC25A2	Q9BXI2	301 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	PRND	Q9UKY0	176 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	FOXA2	Q9Y261	457 aa	Predicted RBP	11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	IGHV3OR16-13	A0A075B7E8	117 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	IGHV3-74	A0A0B4J1X5	117 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001		A0A1W2PS18	150 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	APCS	P02743	223 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	CGB3	P0DN86	165 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	CGB7	P0DN87	165 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	CD69	Q07108	199 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	ZNF841	Q6ZN19	808 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001		Q6ZN92	141 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	BCL6B	Q8N143	479 aa	Predicted RBP	11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	DSCAML1	Q8TD84	2053 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	VPS13C	Q709C8	3753 aa		11.95	□□□□□ -0.5
PRPF8-216	ENST00000577001	HIGD1C	A8MV81	97 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	TYMS	P04818	313 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	UBE2G1	P62253	170 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	GFRAL	Q6UXV0	394 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	CIART	Q8N365	385 aa	Predicted RBP	11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	NUDT10	Q8NFP7	164 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	NUDT11	Q96G61	164 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	SSUH2	Q9Y2M2	353 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001		A0A1W2PPI3	338 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001		J3QW42	95 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	PRSS33	Q8NF86	280 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	OR5B3	Q8NH48	314 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	NOL4L	Q96MY1	436 aa	Predicted RBP	11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	PPIAL4E	A0A075B759	164 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	PPIAL4D	F5H284	164 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001		H0YJW9	148 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	HSBP1	O75506	76 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	IGLV2-8	P01709	118 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	C3orf79	P0CE67	100 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	PPIAL4F	P0DN26	164 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	ZNF124	Q15973	351 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	C1orf194	Q5T5A4	169 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	TMEM136	Q6ZRR5	245 aa		11.94	□□□□□ -0.5
PRPF8-216	ENST00000577001	CACNA1A	O00555	2505 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	VWC2L	B2RUY7	222 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	PDLIM4	P50479	330 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	OR1L8	Q8NGR8	309 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	MKRN2OS	H3BPM6	223 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	NDUFB3	O43676	98 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	HES1	Q14469	280 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	COA6	Q5JTJ3	125 aa	Known RBP	11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	SLC25A48	Q6ZT89	311 aa	Known RBP	11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	PRNT	Q86SH4	94 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	RAB1C	Q92928	201 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	TNFRSF19	Q9NS68	423 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	ZNF586	Q9NXT0	402 aa		11.93	□□□□□ -0.5
PRPF8-216	ENST00000577001	TRGV8	A0A0C4DH27	118 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	CGB1	A6NKQ9	187 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	C22orf46	C9J442	243 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	TCF21	O43680	179 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	TDGF1P3	P51864	188 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	MZT1	Q08AG7	82 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	TMEM108	Q6UXF1	575 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	WFDC3	Q8IUB2	231 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	SORL1	Q92673	2214 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	C16orf97	H3BN30	126 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	CNIH1	O95406	144 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	GPX1	P07203	203 aa		11.92	□□□□□ -0.5
PRPF8-216	ENST00000577001	NUP35	Q8NFH5	326 aa		11.92	□□□□□ -0.5

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