RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 ATOH7Q8N100 152 aa8.4□□□□□ -1.07
USP43-205ENST00000574408 IGFBPL1Q8WX77 278 aa8.4□□□□□ -1.07
USP43-205ENST00000574408 TMEM18Q96B42 140 aa8.4□□□□□ -1.07
USP43-205ENST00000574408 FNDC4Q9H6D8 234 aaPredicted RBP8.4□□□□□ -1.07
USP43-205ENST00000574408 LY6LH3BQJ8 138 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 GCHFRP30047 84 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 TCL1AP56279 114 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 KIAA1644Q3SXP7 199 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 TPTE2P1Q5T6R2 138 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 MIR17HGQ75NE6 70 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 DPM3Q9P2X0 92 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 TRAPPC1Q9Y5R8 145 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 IGLC7A0M8Q6 106 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 M0R1W7 72 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 CRYGBP07316 175 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 AREGP15514 252 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 NPPCP23582 126 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 PLGLAQ15195 96 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 C19orf35Q6ZS72 473 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 PPP1R27Q86WC6 154 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 RNASEH2CQ8TDP1 164 aaKnown RBP8.39□□□□□ -1.07
USP43-205ENST00000574408 YPEL4Q96NS1 127 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 ZFYVE26Q68DK2 2539 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 FOXH1O75593 365 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 AMBPP02760 352 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 SSBP2P81877 361 aaPredicted RBP8.39□□□□□ -1.07
USP43-205ENST00000574408 LHFPL4Q7Z7J7 247 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 NPIPB3Q92617 1050 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 RNF24Q9Y225 148 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 SPG11Q96JI7 2443 aa8.39□□□□□ -1.07
USP43-205ENST00000574408 NOTCH3Q9UM47 2321 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 PMCHP20382 165 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 PRTN3P24158 256 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 OR11H6Q8NGC7 330 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 OR1P1Q8NH06 330 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 PITPNC1Q9UKF7 332 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 IGSF10Q6WRI0 2623 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 PDE6DO43924 150 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 MT-CO2P00403 227 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 COMPP49747 757 aaPredicted RBP8.38□□□□□ -1.07
USP43-205ENST00000574408 EFNA4P52798 201 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 RPL23P62829 140 aaKnown RBP8.38□□□□□ -1.07
USP43-205ENST00000574408 TMEM68Q96MH6 324 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 TXN2Q99757 166 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 NDUFB4O95168 129 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 VENTXO95231 258 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 PRB4P10163 310 aaPredicted RBP8.38□□□□□ -1.07
USP43-205ENST00000574408 CD24P25063 80 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 ZFP36P26651 326 aaKnown RBP8.38□□□□□ -1.07
USP43-205ENST00000574408 RND2P52198 227 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 MMDQ15546 238 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 TMEM256Q8N2U0 113 aa8.38□□□□□ -1.07
USP43-205ENST00000574408 MRPL36Q9P0J6 103 aaKnown RBP8.38□□□□□ -1.07
USP43-205ENST00000574408 YTHDF2Q9Y5A9 579 aaKnown RBP8.38□□□□□ -1.07
USP43-205ENST00000574408 PRSS47A8MTI9 375 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 M0R143 59 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 FCN1O00602 326 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 GZMBP10144 247 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 CEACAM3P40198 252 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 OR2T10Q8NGZ9 312 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 DERL1Q9BUN8 251 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 MAS1LP35410 378 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 LCN2P80188 198 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 ASPHD1Q5U4P2 390 aa8.37□□□□□ -1.07
USP43-205ENST00000574408 IGHV3-21A0A0B4J1V1 117 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 F6UZH7 168 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 OR7C2O60412 319 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 MFAP2P55001 183 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 ZNF90Q03938 601 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 VMO1Q7Z5L0 202 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 SRSF12Q8WXF0 261 aaKnown RBP8.36□□□□□ -1.07
USP43-205ENST00000574408 TECRQ9NZ01 308 aaKnown RBP8.36□□□□□ -1.07
USP43-205ENST00000574408 DOPEY1Q5JWR5 2465 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 SCO2A0A1W2PP80 73 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 ODF3BA8MYP8 253 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 TCTAP57738 103 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 RELQ04864 619 aaPredicted RBP8.36□□□□□ -1.07
USP43-205ENST00000574408 HES1Q14469 280 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 RNF5Q99942 180 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 TXNDC17Q9BRA2 123 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 CNIH1O95406 144 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 OR5G3P0C626 314 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 LGALS4P56470 323 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 ARL6IP6Q8N6S5 226 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 BPESC1Q9GZL8 116 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 CTDSP1Q9GZU7 261 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 TMEM242Q9NWH2 141 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 GOLT1BQ9Y3E0 138 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 MYO18BQ8IUG5 2567 aa8.36□□□□□ -1.07
USP43-205ENST00000574408 USP9XQ93008 2570 aaPredicted RBP8.36□□□□□ -1.07
USP43-205ENST00000574408 TEX22C9J3V5 150 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 MGST1P10620 155 aaKnown RBP8.35□□□□□ -1.07
USP43-205ENST00000574408 SGMS2Q8NHU3 365 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 CFHR4Q92496 578 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 SLC25A33Q9BSK2 321 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 IGKV1D-37A0A075B6S9 117 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
USP43-205ENST00000574408 TCRBV4S1A1TA0A5B7 111 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 MOSP00540 346 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 OR10J4P0C629 311 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms