RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 C2orf83Q53S99 150 aa7.12□□□□□ -1.27
NPLOC4-212ENST00000573328 FAM90A2PQ658T7 463 aa7.12□□□□□ -1.27
NPLOC4-212ENST00000573328 PVRIGQ6DKI7 326 aa7.12□□□□□ -1.27
NPLOC4-212ENST00000573328 ETFRF1Q6IPR1 90 aa7.12□□□□□ -1.27
NPLOC4-212ENST00000573328 NOXA1Q86UR1 476 aa7.12□□□□□ -1.27
NPLOC4-212ENST00000573328 STHQ8IWL8 128 aa7.12□□□□□ -1.27
NPLOC4-212ENST00000573328 OR1S2Q8NGQ3 325 aa7.12□□□□□ -1.27
NPLOC4-212ENST00000573328 SLIRPQ9GZT3 109 aaKnown RBP7.12□□□□□ -1.27
NPLOC4-212ENST00000573328 TNFSF8P32971 234 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 EIF2B2P49770 351 aaKnown RBP7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 AP3S2P59780 193 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 SRPXP78539 464 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 EWSR1Q01844 656 aaKnown RBP eCLIP7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 TMEM187Q14656 261 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 AARDQ4LEZ3 155 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 PYDC2Q56P42 97 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 TMED4Q7Z7H5 227 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 LILRB2Q8N423 598 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 FAM24BQ8N5W8 94 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 OR1S1Q8NH92 325 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 RNASEH2CQ8TDP1 164 aaKnown RBP7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 Q8WTZ3 238 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 GATAD1Q8WUU5 269 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 IL22RA2Q969J5 263 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 ACY3Q96HD9 319 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 RARRES2Q99969 163 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 CACFD1Q9UGQ2 172 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 TMEM56-RWDD3S4R434 201 aa7.11□□□□□ -1.27
NPLOC4-212ENST00000573328 TRAV2A0A0B4J234 112 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 A0A0B4J2A0 478 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 LY6G6CO95867 125 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 IGKV1-17P01599 117 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 IL4P05112 153 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 HNRNPCP07910 306 aaKnown RBP eCLIP7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 ZNF688P0C7X2 276 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 CRYBB3P26998 211 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 S100A5P33763 92 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 CCR6P51684 374 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 SMCO1Q147U7 214 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 PRSS54Q6PEW0 395 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 LYZL2Q7Z4W2 148 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 LGI3Q8N145 548 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 TOMM5Q8N4H5 51 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 OR11H2Q8NH07 326 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 DTD1Q8TEA8 209 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 SHPKQ9UHJ6 478 aa7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 KLK5Q9Y337 293 aaPredicted RBP7.1□□□□□ -1.27
NPLOC4-212ENST00000573328 PLECQ15149 4684 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 PIGBOS1A0A0B4J2F0 54 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 HELTA6NFD8 242 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 IFNA4P05014 189 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 IGLC1P0CG04 106 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 VAMP1P23763 118 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 DHRS2Q13268 280 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 RBMS2Q15434 407 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 NMSQ5H8A3 153 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 LINC00476Q8WZB0 136 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 NPIPB3Q92617 1050 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 RBKSQ9H477 322 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 PAIP2BQ9ULR5 123 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 ALMS1Q8TCU4 4167 aa7.09□□□□□ -1.27
NPLOC4-212ENST00000573328 K7EQG2 157 aa7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 TOMM40O96008 361 aa7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 RD3LP0DJH9 198 aa7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 YPEL3P61236 119 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 SUPT4H1P63272 117 aaKnown RBP7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 CEMP1Q6PRD7 247 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 PHLDA1Q8WV24 401 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 TMEM170AQ8WVE7 144 aa7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 SLC35E1Q96K37 410 aa7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 PBDC1Q9BVG4 233 aa7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 HSPB7Q9UBY9 170 aa7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 FBXL17Q9UF56 701 aa7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 U3KQ87 197 aa7.08□□□□□ -1.28
NPLOC4-212ENST00000573328 DUXBA0A1W2PPF3 345 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 ZFP92A6NM28 416 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 KNCNA6PVL3 124 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 DEFB4AO15263 64 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 IAPPP10997 89 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 ATF4P18848 351 aaPredicted RBP7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 INPP1P49441 399 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 AP2S1P53680 142 aaPredicted RBP7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 SNRPD3P62318 126 aaKnown RBP7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 KLF9Q13886 244 aaPredicted RBP7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 USF2Q15853 346 aaPredicted RBP7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 TMEM128Q5BJH2 165 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 PSMG4Q5JS54 123 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 ACTL10Q5JWF8 245 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 C16orf54Q6UWD8 224 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 OR51G1Q8NGK1 321 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 C11orf45Q8TAV5 145 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 TRIM63Q969Q1 353 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 SOSTQ9BQB4 213 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 MFFQ9GZY8 342 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 V9GYH0 126 aa7.07□□□□□ -1.28
NPLOC4-212ENST00000573328 DNAH1Q9P2D7 4330 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 HYDINQ4G0P3 5121 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 FABP1P07148 127 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 SPP1P10451 314 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms