RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 H0YJW9 148 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 SFTPCP11686 197 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 KLF5Q13887 457 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-207ENST00000572253 VMA21Q3ZAQ7 101 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 MORN5Q5VZ52 161 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 GUCD1Q96NT3 240 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
CCDC40-207ENST00000572253 SMIM15Q7Z3B0 74 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 DAZAP1Q96EP5 407 aaKnown RBP8.72□□□□□ -1.01
CCDC40-207ENST00000572253 ZNRD1Q9P1U0 126 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 RPH3ALQ9UNE2 315 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 YLPM1P49750 1951 aaKnown RBP8.72□□□□□ -1.01
CCDC40-207ENST00000572253 CACNA1HO95180 2353 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 PSMB11A5LHX3 300 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 OR2J3O76001 311 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 DEFB109BQ30KR1 87 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 ZNF474Q6S9Z5 364 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-207ENST00000572253 DEFB123Q8N688 67 aa8.72□□□□□ -1.01
CCDC40-207ENST00000572253 TIMM8BQ9Y5J9 83 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-207ENST00000572253 A8MWL6 223 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 TSPOP30536 169 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 REG1BP48304 166 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 LCN12Q6JVE5 192 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 LINC00305Q7Z4B0 112 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 OR5AN1Q8NGI8 311 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 BLNKQ8WV28 456 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 SMIM12Q96EX1 92 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 EPDR1Q9UM22 224 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 DSCAMO60469 2012 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 HBBP68871 147 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 STPG4Q8N801 248 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 ALKBH7Q9BT30 221 aaPredicted RBP8.71□□□□□ -1.01
CCDC40-207ENST00000572253 TNFRSF19Q9NS68 423 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 WASHC3Q9Y3C0 194 aa8.71□□□□□ -1.01
CCDC40-207ENST00000572253 SOX21Q9Y651 276 aaPredicted RBP8.71□□□□□ -1.01
CCDC40-207ENST00000572253 ORM2P19652 201 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 HINT1P49773 126 aaPredicted RBP8.71□□□□□ -1.02
CCDC40-207ENST00000572253 PTTG1IPP53801 180 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 TEX36Q5VZQ5 186 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 ARL6IP6Q8N6S5 226 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 THAP8Q8NA92 274 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 OR2D3Q8NGH3 330 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 ORAOV1Q8WV07 137 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 H1FXQ92522 213 aaKnown RBP8.71□□□□□ -1.02
CCDC40-207ENST00000572253 TMEM186Q96B77 213 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 FXYD5Q96DB9 178 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 GPR82Q96P67 336 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 PCNX2A6NKB5 2137 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 PGPA6NDG6 321 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 PLAUP00749 431 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 OR1B1Q8NGR6 318 aa8.71□□□□□ -1.02
CCDC40-207ENST00000572253 WDFY3Q8IZQ1 3526 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 M0R296 226 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 P01737 135 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 GPR6P46095 362 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-207ENST00000572253 GNG5P63218 68 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 SRSF6Q13247 344 aaKnown RBP8.7□□□□□ -1.02
CCDC40-207ENST00000572253 SEM1Q6ZVN7 128 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 SSBP4Q9BWG4 385 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-207ENST00000572253 RPP21Q9H633 154 aaKnown RBP8.7□□□□□ -1.02
CCDC40-207ENST00000572253 TANC2Q9HCD6 1990 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 C1orf185Q5T7R7 199 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 ZNF738Q8NE65 137 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 OR8B3Q8NGG8 313 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 ZNF596Q8TC21 504 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 OR8B2Q96RD0 313 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 ZNF318Q5VUA4 2279 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 FRYLO94915 3013 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 HSBP1L1C9JCN9 74 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 IGHV3-48P01763 117 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 SSBP2P81877 361 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-207ENST00000572253 WT1-ASQ06250 92 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 FAM71F2Q6NXP2 309 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 PATE2Q6UY27 113 aa8.7□□□□□ -1.02
CCDC40-207ENST00000572253 FNDC4Q9H6D8 234 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-207ENST00000572253 ROS1P08922 2347 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 CCL3L1P16619 93 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 CD40P25942 277 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 CCL8P80075 99 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 C10orf55Q5SWW7 151 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 C5orf17Q8NAS9 161 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 PPIAL4AQ9Y536 164 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 NDUFB3O43676 98 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 NBEAP1P0C6P0 100 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 FMC1Q96HJ9 113 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 IGHV2-26A0A0B4J1V2 119 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 MC5RP33032 325 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 LRRC10Q5BKY1 277 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 GDF5OSQ5U4N7 250 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 DSCAML1Q8TD84 2053 aa8.69□□□□□ -1.02
CCDC40-207ENST00000572253 CHEK1O14757 476 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 ENSAO43768 121 aaKnown RBP8.68□□□□□ -1.02
CCDC40-207ENST00000572253 SLC25A17O43808 307 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 CT83Q5H943 113 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 ASPHD1Q5U4P2 390 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 EBLN2Q6P2I7 272 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 TMEM108Q6UXF1 575 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms