RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 NPPCP23582 126 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 APOC4P55056 127 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 YPEL3P61236 119 aaPredicted RBP21.76■■□□□ 1.07
RAB40C-211ENST00000568586 TIGITQ495A1 244 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 ETFRF1Q6IPR1 90 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 Q6ZWC4 215 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 DTD1Q8TEA8 209 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 RBKSQ9H477 322 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 TP53TG1Q9Y2A0 90 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 SACSQ9NZJ4 4579 aa21.76■■□□□ 1.07
RAB40C-211ENST00000568586 UBE2CO00762 179 aa21.75■■□□□ 1.07
RAB40C-211ENST00000568586 NXPH3O95157 252 aa21.75■■□□□ 1.07
RAB40C-211ENST00000568586 RND2P52198 227 aa21.75■■□□□ 1.07
RAB40C-211ENST00000568586 LYSTQ99698 3801 aa21.75■■□□□ 1.07
RAB40C-211ENST00000568586 TMEM231Q9H6L2 316 aa21.75■■□□□ 1.07
RAB40C-211ENST00000568586 PAFAH1B2P68402 229 aa21.74■■□□□ 1.07
RAB40C-211ENST00000568586 BAK1Q16611 211 aa21.74■■□□□ 1.07
RAB40C-211ENST00000568586 WFDC3Q8IUB2 231 aa21.74■■□□□ 1.07
RAB40C-211ENST00000568586 METTL26Q96S19 204 aa21.74■■□□□ 1.07
RAB40C-211ENST00000568586 U3KQE9 123 aa21.74■■□□□ 1.07
RAB40C-211ENST00000568586 A0A1W2PS18 150 aa21.73■■□□□ 1.07
RAB40C-211ENST00000568586 DFFBO76075 338 aa21.73■■□□□ 1.07
RAB40C-211ENST00000568586 SFT2D2O95562 160 aa21.73■■□□□ 1.07
RAB40C-211ENST00000568586 UBE2MP61081 183 aaKnown RBP21.73■■□□□ 1.07
RAB40C-211ENST00000568586 PPP1R1AQ13522 171 aa21.73■■□□□ 1.07
RAB40C-211ENST00000568586 RBMS2Q15434 407 aaKnown RBP21.73■■□□□ 1.07
RAB40C-211ENST00000568586 SDHCQ99643 169 aaPredicted RBP21.73■■□□□ 1.07
RAB40C-211ENST00000568586 NAP1L6A6NFF2 107 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 IFNA10P01566 189 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 VAMP1P23763 118 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 OR10J1P30954 320 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 CENPSQ8N2Z9 138 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 OR1S1Q8NH92 325 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 IL17DQ8TAD2 202 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 MS4A6AQ9H2W1 248 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 NDUFA13Q9P0J0 144 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 TMED3Q9Y3Q3 217 aa21.72■■□□□ 1.07
RAB40C-211ENST00000568586 FAM90A26D6RGX4 464 aa21.71■■□□□ 1.07
RAB40C-211ENST00000568586 TFPI2P48307 235 aa21.71■■□□□ 1.07
RAB40C-211ENST00000568586 ZFAND6Q6FIF0 208 aa21.71■■□□□ 1.07
RAB40C-211ENST00000568586 Q8WTZ3 238 aa21.71■■□□□ 1.07
RAB40C-211ENST00000568586 NPIPB3Q92617 1050 aa21.71■■□□□ 1.07
RAB40C-211ENST00000568586 MAP6D1Q9H9H5 199 aa21.71■■□□□ 1.07
RAB40C-211ENST00000568586 IGKV3-7A0A075B6H7 116 aa21.7■■□□□ 1.06
RAB40C-211ENST00000568586 IGHV3-66A0A0C4DH42 116 aa21.7■■□□□ 1.06
RAB40C-211ENST00000568586 APRG1Q8IVJ8 170 aa21.7■■□□□ 1.06
RAB40C-211ENST00000568586 GBGT1Q8N5D6 347 aa21.7■■□□□ 1.06
RAB40C-211ENST00000568586 NDUFB6O95139 128 aa21.69■■□□□ 1.06
RAB40C-211ENST00000568586 GPX4P36969 197 aaPredicted RBP21.69■■□□□ 1.06
RAB40C-211ENST00000568586 TRIQKQ629K1 86 aa21.68■■□□□ 1.06
RAB40C-211ENST00000568586 STPG3Q8N7X2 389 aa21.68■■□□□ 1.06
RAB40C-211ENST00000568586 RYR2Q92736 4967 aa21.68■■□□□ 1.06
RAB40C-211ENST00000568586 SPRY2O43597 315 aa21.67■■□□□ 1.06
RAB40C-211ENST00000568586 P2RY1P47900 373 aa21.67■■□□□ 1.06
RAB40C-211ENST00000568586 RNF183Q96D59 192 aa21.67■■□□□ 1.06
RAB40C-211ENST00000568586 DNASE2O00115 360 aaPredicted RBP21.66■■□□□ 1.06
RAB40C-211ENST00000568586 TOMM40O96008 361 aa21.66■■□□□ 1.06
RAB40C-211ENST00000568586 ZNF124Q15973 351 aa21.66■■□□□ 1.06
RAB40C-211ENST00000568586 ACY3Q96HD9 319 aa21.66■■□□□ 1.06
RAB40C-211ENST00000568586 NARS2Q96I59 477 aaKnown RBP21.66■■□□□ 1.06
RAB40C-211ENST00000568586 IFNA4P05014 189 aa21.65■■□□□ 1.06
RAB40C-211ENST00000568586 RPL35AP18077 110 aaKnown RBP21.65■■□□□ 1.06
RAB40C-211ENST00000568586 INPP1P49441 399 aa21.65■■□□□ 1.06
RAB40C-211ENST00000568586 GRAMD2BQ96HH9 432 aa21.65■■□□□ 1.06
RAB40C-211ENST00000568586 C7orf50Q9BRJ6 194 aaKnown RBP21.65■■□□□ 1.06
RAB40C-211ENST00000568586 C9orf170A2RU37 121 aa21.64■■□□□ 1.05
RAB40C-211ENST00000568586 K7EQG2 157 aa21.64■■□□□ 1.05
RAB40C-211ENST00000568586 MED6O75586 246 aa21.64■■□□□ 1.05
RAB40C-211ENST00000568586 HNRNPCP07910 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
RAB40C-211ENST00000568586 RD3LP0DJH9 198 aa21.64■■□□□ 1.05
RAB40C-211ENST00000568586 BTCP35070 178 aa21.64■■□□□ 1.05
RAB40C-211ENST00000568586 RPL11P62913 178 aaKnown RBP21.64■■□□□ 1.05
RAB40C-211ENST00000568586 USF2Q15853 346 aaPredicted RBP21.64■■□□□ 1.05
RAB40C-211ENST00000568586 DEFB135Q30KP9 77 aa21.64■■□□□ 1.05
RAB40C-211ENST00000568586 GAMTQ14353 236 aa21.63■■□□□ 1.05
RAB40C-211ENST00000568586 C16orf54Q6UWD8 224 aa21.63■■□□□ 1.05
RAB40C-211ENST00000568586 FAM24BQ8N5W8 94 aa21.63■■□□□ 1.05
RAB40C-211ENST00000568586 GLMPQ8WWB7 406 aa21.63■■□□□ 1.05
RAB40C-211ENST00000568586 CSTL1Q9H114 145 aa21.63■■□□□ 1.05
RAB40C-211ENST00000568586 DNAH1Q9P2D7 4330 aa21.62■■□□□ 1.05
RAB40C-211ENST00000568586 IL4P05112 153 aa21.62■■□□□ 1.05
RAB40C-211ENST00000568586 PSG1P11464 419 aa21.62■■□□□ 1.05
RAB40C-211ENST00000568586 IL7P13232 177 aa21.62■■□□□ 1.05
RAB40C-211ENST00000568586 GGNBP1Q5YKI7 109 aa21.62■■□□□ 1.05
RAB40C-211ENST00000568586 DCANP1Q8TF63 244 aa21.62■■□□□ 1.05
RAB40C-211ENST00000568586 CIB3Q96Q77 187 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-211ENST00000568586 IGKV1D-37A0A075B6S9 117 aa21.61■■□□□ 1.05
RAB40C-211ENST00000568586 LCE6AA0A183 80 aa21.61■■□□□ 1.05
RAB40C-211ENST00000568586 HELTA6NFD8 242 aa21.61■■□□□ 1.05
RAB40C-211ENST00000568586 HOXB5P09067 269 aa21.61■■□□□ 1.05
RAB40C-211ENST00000568586 DEFB131AP59861 70 aa21.61■■□□□ 1.05
RAB40C-211ENST00000568586 FLVCR2Q9UPI3 526 aa21.61■■□□□ 1.05
RAB40C-211ENST00000568586 CENPXA8MT69 81 aa21.6■■□□□ 1.05
RAB40C-211ENST00000568586 BUB3O43684 328 aa21.6■■□□□ 1.05
RAB40C-211ENST00000568586 SYNGR2O43760 224 aa21.6■■□□□ 1.05
RAB40C-211ENST00000568586 ATF4P18848 351 aaPredicted RBP21.6■■□□□ 1.05
RAB40C-211ENST00000568586 EIF2B2P49770 351 aaKnown RBP21.6■■□□□ 1.05
RAB40C-211ENST00000568586 AP2S1P53680 142 aaPredicted RBP21.6■■□□□ 1.05
RAB40C-211ENST00000568586 RAB11AP62491 216 aa21.6■■□□□ 1.05
RAB40C-211ENST00000568586 DHRS2Q13268 280 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms