RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 TOMM20LQ6UXN7 152 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 ZNF600Q6ZNG1 722 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 OR1S1Q8NH92 325 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 SVIPQ8NHG7 77 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 ACY3Q96HD9 319 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 ATP6V0BQ99437 205 aa7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 FNDC4Q9H6D8 234 aaPredicted RBP7.53□□□□□ -1.2
GTF3C1-206ENST00000566779 A0A1B0GU03 582 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 CLN5O75503 358 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 DFFBO76075 338 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 APOHP02749 345 aaPredicted RBP7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 NPY1RP25929 384 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 HTR2BP41595 481 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 PMS2P11Q13670 270 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 TMEM187Q14656 261 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 SPANXN2Q5MJ10 180 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 TEPPQ6URK8 271 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 LINC00322Q6ZN03 302 aaPredicted RBP7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 LYZL2Q7Z4W2 148 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 LGI3Q8N145 548 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 STXBP6Q8NFX7 210 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 NARS2Q96I59 477 aaKnown RBP7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 V9GYH0 126 aa7.52□□□□□ -1.21
GTF3C1-206ENST00000566779 TMEM50AO95807 157 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 IAPPP10997 89 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 FCGR2BP31994 310 aaPredicted RBP7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 PAFAH1B2P68402 229 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 SRPXP78539 464 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 KLF9Q13886 244 aaPredicted RBP7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 SMCO1Q147U7 214 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 ZNF79Q15937 498 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 TRIQKQ629K1 86 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 LEMD1Q68G75 181 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 STPG3Q8N7X2 389 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 DTD1Q8TEA8 209 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 TRIM63Q969Q1 353 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 ZNF414Q96IQ9 312 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 OR10C1Q96KK4 312 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 METTL26Q96S19 204 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 RBKSQ9H477 322 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 MAP6D1Q9H9H5 199 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 TMEM56-RWDD3S4R434 201 aa7.51□□□□□ -1.21
GTF3C1-206ENST00000566779 KMT2CQ8NEZ4 4911 aaKnown RBP7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 INS-IGF2F8WCM5 200 aa7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 IFNA4P05014 189 aa7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 NPPCP23582 126 aa7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 OR10J1P30954 320 aa7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 SUPT4H1P63272 117 aaKnown RBP7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 OR4X1Q8NH49 305 aa7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 OR52E5Q8NH55 327 aa7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 IL22RA2Q969J5 263 aa7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 OVOL2Q9BRP0 275 aa7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 TMEM231Q9H6L2 316 aa7.5□□□□□ -1.21
GTF3C1-206ENST00000566779 A0A0B4J2A0 478 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 A0A0J9YWU9 116 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 CXorf65A6NEN9 183 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 SPRY2O43597 315 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 P2RY1P47900 373 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 CCR6P51684 374 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 DEFB131AP59861 70 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 TNFRSF9Q07011 255 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 BSXQ3C1V8 233 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 C2orf83Q53S99 150 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 ETFRF1Q6IPR1 90 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 PRSS54Q6PEW0 395 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 CENPSQ8N2Z9 138 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 OR1S2Q8NGQ3 325 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 NPIPB3Q92617 1050 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 GALNT14Q96FL9 552 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 GRAMD2BQ96HH9 432 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 SOSTQ9BQB4 213 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 PBDC1Q9BVG4 233 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 MAGT1Q9H0U3 335 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 RBM38Q9H0Z9 239 aaKnown RBP7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 MS4A6AQ9H2W1 248 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 SHPKQ9UHJ6 478 aa7.49□□□□□ -1.21
GTF3C1-206ENST00000566779 TRAV30A0A087WSZ9 112 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 A0A1W2PS18 150 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 IGKV1-17P01599 117 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 IL4P05112 153 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 HOXB5P09067 269 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 ZNF688P0C7X2 276 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 IGLC1P0CG04 106 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 SLC25A4P12235 298 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 PPP1R1AQ13522 171 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 RBMS2Q15434 407 aaKnown RBP7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 NMSQ5H8A3 153 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 LYG2Q86SG7 212 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 CCDC190Q86UF4 302 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 FAM24BQ8N5W8 94 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 IL17DQ8TAD2 202 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 RNASEH2CQ8TDP1 164 aaKnown RBP7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 Q8WTZ3 238 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 TMEM170AQ8WVE7 144 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 SLC35E1Q96K37 410 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 TENM2Q9NT68 2774 aa7.48□□□□□ -1.21
GTF3C1-206ENST00000566779 LCE6AA0A183 80 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 ZFP92A6NM28 416 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 MPTX1A8MV57 137 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms