RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 C14orf166Q9Y224 244 aaKnown RBP10.9□□□□□ -0.66
RNF40-209ENST00000566703 OR5AC1P0C628 307 aa10.89□□□□□ -0.67
RNF40-209ENST00000566703 RBMY1A1P0DJD3 496 aaKnown RBP10.89□□□□□ -0.67
RNF40-209ENST00000566703 RBMY1CP0DJD4 496 aa10.89□□□□□ -0.67
RNF40-209ENST00000566703 RBMY1FQ15415 496 aaKnown RBP10.89□□□□□ -0.67
RNF40-209ENST00000566703 GPR107Q5VW38 600 aa10.89□□□□□ -0.67
RNF40-209ENST00000566703 PRSS54Q6PEW0 395 aa10.89□□□□□ -0.67
RNF40-209ENST00000566703 C16orf54Q6UWD8 224 aa10.89□□□□□ -0.67
RNF40-209ENST00000566703 SELENOHQ8IZQ5 122 aaKnown RBP10.89□□□□□ -0.67
RNF40-209ENST00000566703 NAA50Q9GZZ1 169 aaKnown RBP10.89□□□□□ -0.67
RNF40-209ENST00000566703 NAA60Q9H7X0 242 aa10.89□□□□□ -0.67
RNF40-209ENST00000566703 HEYLQ9NQ87 328 aaPredicted RBP10.89□□□□□ -0.67
RNF40-209ENST00000566703 APLNQ9ULZ1 77 aa10.89□□□□□ -0.67
RNF40-209ENST00000566703 GPR132Q9UNW8 380 aa10.89□□□□□ -0.67
RNF40-209ENST00000566703 IGHV4-28A0A0C4DH34 117 aa10.88□□□□□ -0.67
RNF40-209ENST00000566703 DISC1C4P0D8 188 aa10.88□□□□□ -0.67
RNF40-209ENST00000566703 HNRNPCP07910 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
RNF40-209ENST00000566703 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
RNF40-209ENST00000566703 CENPSQ8N2Z9 138 aa10.88□□□□□ -0.67
RNF40-209ENST00000566703 GPR146Q96CH1 333 aa10.88□□□□□ -0.67
RNF40-209ENST00000566703 RABL2AQ9UBK7 228 aaPredicted RBP10.88□□□□□ -0.67
RNF40-209ENST00000566703 RABL2BQ9UNT1 228 aa10.88□□□□□ -0.67
RNF40-209ENST00000566703 KNCNA6PVL3 124 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 IGLL5B9A064 214 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 OR10J1P30954 320 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 RND2P52198 227 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 DHRS2Q13268 280 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 ACTL10Q5JWF8 245 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 CSNK1G2-AS1Q8NCQ2 148 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 SLC24A4Q8NFF2 622 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 LHFPL5Q8TAF8 219 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 GLMPQ8WWB7 406 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 RAB40CQ96S21 281 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 MIXL1Q9H2W2 232 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 CACNG5Q9UF02 275 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 KCNIP3Q9Y2W7 256 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 TMEM56-RWDD3S4R434 201 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 X6R8D5 127 aa10.87□□□□□ -0.67
RNF40-209ENST00000566703 TRAV10A0A0B4J240 114 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 CRYM-AS1A6NIL9 109 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 CEBPZOSA8MTT3 80 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 CTDSPLO15194 276 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 GSTZ1O43708 216 aaPredicted RBP10.86□□□□□ -0.67
RNF40-209ENST00000566703 HLA-DMBP28068 263 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 NUTF2P61970 127 aaKnown RBP10.86□□□□□ -0.67
RNF40-209ENST00000566703 PRR20EP86478 221 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 PRR20CP86479 221 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 PRR20DP86480 221 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 PRR20BP86481 221 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 PRR20AP86496 221 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 TMEM268Q5VZI3 342 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 IL22RA2Q969J5 263 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 C1QTNF4Q9BXJ3 329 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 TBC1D24Q9ULP9 559 aa10.86□□□□□ -0.67
RNF40-209ENST00000566703 RGS5O15539 181 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 TOMM40O96008 361 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 AKAIN1P0CW23 69 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 RD3LP0DJH9 198 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 C4BPBP20851 252 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 ATP5IP56385 69 aaPredicted RBP10.85□□□□□ -0.67
RNF40-209ENST00000566703 SNRPD3P62318 126 aaKnown RBP10.85□□□□□ -0.67
RNF40-209ENST00000566703 NMSQ5H8A3 153 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 SMIM4Q8WVI0 70 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 NPIPB3Q92617 1050 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 SCGB3A2Q96PL1 93 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 PRRT1Q99946 306 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 PFDN2Q9UHV9 154 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 U3KQ87 197 aa10.85□□□□□ -0.67
RNF40-209ENST00000566703 ELOA3CA0A087WX78 387 aaPredicted RBP10.84□□□□□ -0.67
RNF40-209ENST00000566703 CTDSP2O14595 271 aa10.84□□□□□ -0.67
RNF40-209ENST00000566703 BUB3O43684 328 aa10.84□□□□□ -0.67
RNF40-209ENST00000566703 SMIM18P0DKX4 95 aa10.84□□□□□ -0.67
RNF40-209ENST00000566703 SULT1A3P0DMM9 295 aa10.84□□□□□ -0.67
RNF40-209ENST00000566703 SULT1A4P0DMN0 295 aa10.84□□□□□ -0.67
RNF40-209ENST00000566703 NPY1RP25929 384 aa10.84□□□□□ -0.67
RNF40-209ENST00000566703 USF2Q15853 346 aaPredicted RBP10.84□□□□□ -0.67
RNF40-209ENST00000566703 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
RNF40-209ENST00000566703 TMEM170AQ8WVE7 144 aa10.84□□□□□ -0.67
RNF40-209ENST00000566703 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
RNF40-209ENST00000566703 FAM90A26D6RGX4 464 aa10.83□□□□□ -0.68
RNF40-209ENST00000566703 NXPH3O95157 252 aa10.83□□□□□ -0.68
RNF40-209ENST00000566703 IL4P05112 153 aa10.83□□□□□ -0.68
RNF40-209ENST00000566703 NUP62P37198 522 aaPredicted RBP10.83□□□□□ -0.68
RNF40-209ENST00000566703 CCR6P51684 374 aa10.83□□□□□ -0.68
RNF40-209ENST00000566703 FAAP20Q6NZ36 180 aa10.83□□□□□ -0.68
RNF40-209ENST00000566703 RNF126Q9BV68 326 aa10.83□□□□□ -0.68
RNF40-209ENST00000566703 PIGBOS1A0A0B4J2F0 54 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 H3BMM0 161 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 IFNA10P01566 189 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 PSG1P11464 419 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 KLF9Q13886 244 aaPredicted RBP10.82□□□□□ -0.68
RNF40-209ENST00000566703 SIGLEC15Q6ZMC9 328 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 Q6ZTC4 211 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 GPR141Q7Z602 305 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 OR4C16Q8NGL9 310 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 ACY3Q96HD9 319 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 DIRAS2Q96HU8 199 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 CLEC5AQ9NY25 188 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 HSPB7Q9UBY9 170 aa10.82□□□□□ -0.68
RNF40-209ENST00000566703 SCP2D1Q9UJQ7 156 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms