RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 TRBV20OR9-2A0A075B6H5 130 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 LY6HO94772 140 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 HNF1AP20823 631 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 FXYD3Q14802 87 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 VMO1Q7Z5L0 202 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 HIST3H2BBQ8N257 126 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 ITLN2Q8WWU7 325 aaPredicted RBP10.68□□□□□ -0.7
LINC00563-201ENST00000566370 SMIM12Q96EX1 92 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 ZNF503Q96F45 646 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 NIT2Q9NQR4 276 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 THYN1Q9P016 225 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 CDC42EP3Q9UKI2 254 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 LOC400499M0QZD8 3231 aa10.68□□□□□ -0.7
LINC00563-201ENST00000566370 TNCP24821 2201 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 XKRY2A2RUG3 117 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 PGPEP1LA6NFU8 196 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 GGTLC3B5MD39 225 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 PEX7O00628 323 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 ISLRO14498 428 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 MT-ND6P03923 174 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 BRS3P32247 399 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 CLEC12BQ2HXU8 276 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 C5orf64Q2M2E5 130 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 DNLZQ5SXM8 178 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 WDR73Q6P4I2 378 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 CFHR4Q92496 578 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 WNT10AQ9GZT5 417 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 LPAR2Q9HBW0 351 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 AURKAIP1Q9NWT8 199 aaPredicted RBP10.67□□□□□ -0.7
LINC00563-201ENST00000566370 SPTA1P02549 2419 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 MGAQ8IWI9 3026 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 GCGP01275 180 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 SLC25A5P05141 298 aaKnown RBP10.67□□□□□ -0.7
LINC00563-201ENST00000566370 MGST1P10620 155 aaKnown RBP10.67□□□□□ -0.7
LINC00563-201ENST00000566370 HIST1H1BP16401 226 aaKnown RBP10.67□□□□□ -0.7
LINC00563-201ENST00000566370 CDKN1AP38936 164 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 SSBP2P81877 361 aaPredicted RBP10.67□□□□□ -0.7
LINC00563-201ENST00000566370 COA6Q5JTJ3 125 aaKnown RBP10.67□□□□□ -0.7
LINC00563-201ENST00000566370 PATE2Q6UY27 113 aa10.67□□□□□ -0.7
LINC00563-201ENST00000566370 TRAV5A0A0B4J249 113 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 IGHV2-70DA0A0C4DH43 119 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 NPIPB5A8MRT5 1133 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 TOX4O94842 621 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 IGHV3-48P01763 117 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 FAM106CPP0CH98 169 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 GNLYP22749 145 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 PDLIM4P50479 330 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 MFAP2P55001 183 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 DLX1P56177 255 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 LYZP61626 148 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 KLRD1Q13241 179 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 IBA57Q5T440 356 aaKnown RBP10.66□□□□□ -0.7
LINC00563-201ENST00000566370 ZNF329Q86UD4 541 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 C5orf17Q8NAS9 161 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 OR10D4PQ8NGN7 298 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 ARPC1AQ92747 370 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 RBM14Q96PK6 669 aaKnown RBP10.66□□□□□ -0.7
LINC00563-201ENST00000566370 TMEM14CQ9P0S9 112 aa10.66□□□□□ -0.7
LINC00563-201ENST00000566370 MALRD1Q5VYJ5 2156 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 I3L2K1 104 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 K7EN84 100 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 PHOX2AO14813 284 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 NBEAP1P0C6P0 100 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 IGLC1P0CG04 106 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 RD3LP0DJH9 198 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 APELAP0DMC3 54 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 PYYP10082 97 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 FABP4P15090 132 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 TMEM11P17152 192 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 HOXB4P17483 251 aaPredicted RBP10.65□□□□□ -0.7
LINC00563-201ENST00000566370 YPEL3P61236 119 aaPredicted RBP10.65□□□□□ -0.7
LINC00563-201ENST00000566370 PRB3Q04118 309 aaPredicted RBP10.65□□□□□ -0.7
LINC00563-201ENST00000566370 ZNF562Q6V9R5 426 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 TMEM18Q96B42 140 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 TMEM68Q96MH6 324 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 GPR61Q9BZJ8 451 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 SERTAD4Q9NUC0 356 aa10.65□□□□□ -0.7
LINC00563-201ENST00000566370 NCBP2LA6PVI3 153 aaKnown RBP10.64□□□□□ -0.71
LINC00563-201ENST00000566370 UBE2E1P51965 193 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 MFAP4P55083 255 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 FAM231DQ6ZW35 169 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 LHFPL4Q7Z7J7 247 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 BAGE2Q86Y30 109 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 OR4F17Q8NGA8 305 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 FMC1Q96HJ9 113 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 IGF2BP2-AS1Q96M15 143 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 PACRGQ96M98 296 aaPredicted RBP10.64□□□□□ -0.71
LINC00563-201ENST00000566370 ZNF48Q96MX3 618 aaPredicted RBP10.64□□□□□ -0.71
LINC00563-201ENST00000566370 SIRPDQ9H106 197 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 MRPL36Q9P0J6 103 aaKnown RBP10.64□□□□□ -0.71
LINC00563-201ENST00000566370 EPDR1Q9UM22 224 aa10.64□□□□□ -0.71
LINC00563-201ENST00000566370 IGF2RP11717 2491 aa10.63□□□□□ -0.71
LINC00563-201ENST00000566370 ZNF705GA8MUZ8 300 aaPredicted RBP10.63□□□□□ -0.71
LINC00563-201ENST00000566370 K7EQM0 130 aa10.63□□□□□ -0.71
LINC00563-201ENST00000566370 FCN1O00602 326 aa10.63□□□□□ -0.71
LINC00563-201ENST00000566370 GATCO43716 136 aaKnown RBP10.63□□□□□ -0.71
LINC00563-201ENST00000566370 GNG7O60262 68 aa10.63□□□□□ -0.71
LINC00563-201ENST00000566370 TOMM40O96008 361 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms