RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 RARRES2Q99969 163 aa14.82□□□□□ -0.04
CLN6-207ENST00000566347 RABAC1Q9UI14 185 aa14.82□□□□□ -0.04
CLN6-207ENST00000566347 KLK5Q9Y337 293 aaPredicted RBP14.82□□□□□ -0.04
CLN6-207ENST00000566347 SULT1A3P0DMM9 295 aa14.81□□□□□ -0.04
CLN6-207ENST00000566347 SULT1A4P0DMN0 295 aa14.81□□□□□ -0.04
CLN6-207ENST00000566347 P2RY1P47900 373 aa14.81□□□□□ -0.04
CLN6-207ENST00000566347 ETFRF1Q6IPR1 90 aa14.81□□□□□ -0.04
CLN6-207ENST00000566347 PRSS54Q6PEW0 395 aa14.81□□□□□ -0.04
CLN6-207ENST00000566347 EPPK1P58107 5090 aaKnown RBP14.8□□□□□ -0.04
CLN6-207ENST00000566347 CA1P00915 261 aaPredicted RBP14.8□□□□□ -0.04
CLN6-207ENST00000566347 IGLC1P0CG04 106 aa14.8□□□□□ -0.04
CLN6-207ENST00000566347 EIF2B2P49770 351 aaKnown RBP14.8□□□□□ -0.04
CLN6-207ENST00000566347 RND2P52198 227 aa14.8□□□□□ -0.04
CLN6-207ENST00000566347 TMEM187Q14656 261 aa14.8□□□□□ -0.04
CLN6-207ENST00000566347 LEMD1Q68G75 181 aa14.8□□□□□ -0.04
CLN6-207ENST00000566347 STXBP6Q8NFX7 210 aa14.8□□□□□ -0.04
CLN6-207ENST00000566347 Q8WTZ3 238 aa14.8□□□□□ -0.04
CLN6-207ENST00000566347 SLIRPQ9GZT3 109 aaKnown RBP14.8□□□□□ -0.04
CLN6-207ENST00000566347 MCUBQ9NWR8 336 aa14.8□□□□□ -0.04
CLN6-207ENST00000566347 FABP12A6NFH5 140 aa14.79□□□□□ -0.04
CLN6-207ENST00000566347 K7EQG2 157 aa14.79□□□□□ -0.04
CLN6-207ENST00000566347 NPY1RP25929 384 aa14.79□□□□□ -0.04
CLN6-207ENST00000566347 OR10J1P30954 320 aa14.79□□□□□ -0.04
CLN6-207ENST00000566347 YPEL3P61236 119 aaPredicted RBP14.79□□□□□ -0.04
CLN6-207ENST00000566347 NMSQ5H8A3 153 aa14.79□□□□□ -0.04
CLN6-207ENST00000566347 STHQ8IWL8 128 aa14.79□□□□□ -0.04
CLN6-207ENST00000566347 FAM24BQ8N5W8 94 aa14.79□□□□□ -0.04
CLN6-207ENST00000566347 OR11H2Q8NH07 326 aa14.79□□□□□ -0.04
CLN6-207ENST00000566347 A0A0B4J2A0 478 aa14.78□□□□□ -0.04
CLN6-207ENST00000566347 H3BMQ9 156 aa14.78□□□□□ -0.04
CLN6-207ENST00000566347 ANXA3P12429 323 aa14.78□□□□□ -0.04
CLN6-207ENST00000566347 TNFSF8P32971 234 aa14.78□□□□□ -0.04
CLN6-207ENST00000566347 CCR6P51684 374 aa14.78□□□□□ -0.04
CLN6-207ENST00000566347 SRPXP78539 464 aa14.78□□□□□ -0.04
CLN6-207ENST00000566347 SOSTQ9BQB4 213 aa14.78□□□□□ -0.04
CLN6-207ENST00000566347 C11orf68Q9H3H3 251 aaKnown RBP14.78□□□□□ -0.04
CLN6-207ENST00000566347 SHPKQ9UHJ6 478 aa14.78□□□□□ -0.04
CLN6-207ENST00000566347 PIGBOS1A0A0B4J2F0 54 aa14.77□□□□□ -0.05
CLN6-207ENST00000566347 HELTA6NFD8 242 aa14.77□□□□□ -0.05
CLN6-207ENST00000566347 LY6G6CO95867 125 aa14.77□□□□□ -0.05
CLN6-207ENST00000566347 HNRNPCP07910 306 aaKnown RBP eCLIP14.77□□□□□ -0.05
CLN6-207ENST00000566347 AKR1C4P17516 323 aa14.77□□□□□ -0.05
CLN6-207ENST00000566347 RBMS2Q15434 407 aaKnown RBP14.77□□□□□ -0.05
CLN6-207ENST00000566347 MCFD2Q8NI22 146 aa14.77□□□□□ -0.05
CLN6-207ENST00000566347 TMEM170AQ8WVE7 144 aa14.77□□□□□ -0.05
CLN6-207ENST00000566347 MFFQ9GZY8 342 aa14.77□□□□□ -0.05
CLN6-207ENST00000566347 U3KQ87 197 aa14.77□□□□□ -0.05
CLN6-207ENST00000566347 U3KQE9 123 aa14.77□□□□□ -0.05
CLN6-207ENST00000566347 NXPH3O95157 252 aa14.76□□□□□ -0.05
CLN6-207ENST00000566347 IFNA10P01566 189 aa14.76□□□□□ -0.05
CLN6-207ENST00000566347 FAUP35544 74 aaKnown RBP14.76□□□□□ -0.05
CLN6-207ENST00000566347 AP2S1P53680 142 aaPredicted RBP14.76□□□□□ -0.05
CLN6-207ENST00000566347 SMCO1Q147U7 214 aa14.76□□□□□ -0.05
CLN6-207ENST00000566347 TMEM41BQ5BJD5 291 aa14.76□□□□□ -0.05
CLN6-207ENST00000566347 LGI3Q8N145 548 aa14.76□□□□□ -0.05
CLN6-207ENST00000566347 DCANP1Q8TF63 244 aa14.76□□□□□ -0.05
CLN6-207ENST00000566347 PHLDA1Q8WV24 401 aaPredicted RBP14.76□□□□□ -0.05
CLN6-207ENST00000566347 PRR13Q9NZ81 148 aa14.76□□□□□ -0.05
CLN6-207ENST00000566347 HSPB7Q9UBY9 170 aa14.76□□□□□ -0.05
CLN6-207ENST00000566347 SUPT4H1P63272 117 aaKnown RBP14.75□□□□□ -0.05
CLN6-207ENST00000566347 C16orf54Q6UWD8 224 aa14.75□□□□□ -0.05
CLN6-207ENST00000566347 DTD1Q8TEA8 209 aa14.75□□□□□ -0.05
CLN6-207ENST00000566347 NPIPB3Q92617 1050 aa14.75□□□□□ -0.05
CLN6-207ENST00000566347 TOMM40O96008 361 aa14.74□□□□□ -0.05
CLN6-207ENST00000566347 IL4P05112 153 aa14.74□□□□□ -0.05
CLN6-207ENST00000566347 ZNF688P0C7X2 276 aa14.74□□□□□ -0.05
CLN6-207ENST00000566347 SPP1P10451 314 aa14.74□□□□□ -0.05
CLN6-207ENST00000566347 ATP5IP56385 69 aaPredicted RBP14.74□□□□□ -0.05
CLN6-207ENST00000566347 AP3S2P59780 193 aa14.74□□□□□ -0.05
CLN6-207ENST00000566347 MORN3Q6PF18 240 aaPredicted RBP14.74□□□□□ -0.05
CLN6-207ENST00000566347 LYZL2Q7Z4W2 148 aa14.74□□□□□ -0.05
CLN6-207ENST00000566347 TRPT1Q86TN4 253 aaKnown RBP14.74□□□□□ -0.05
CLN6-207ENST00000566347 C11orf45Q8TAV5 145 aa14.74□□□□□ -0.05
CLN6-207ENST00000566347 ACY3Q96HD9 319 aa14.74□□□□□ -0.05
CLN6-207ENST00000566347 BIRC6Q9NR09 4857 aa14.73□□□□□ -0.05
CLN6-207ENST00000566347 RD3LP0DJH9 198 aa14.73□□□□□ -0.05
CLN6-207ENST00000566347 DHRS2Q13268 280 aa14.73□□□□□ -0.05
CLN6-207ENST00000566347 GLMPQ8WWB7 406 aa14.73□□□□□ -0.05
CLN6-207ENST00000566347 RBKSQ9H477 322 aa14.73□□□□□ -0.05
CLN6-207ENST00000566347 AGRNO00468 2067 aa14.72□□□□□ -0.05
CLN6-207ENST00000566347 DUXBA0A1W2PPF3 345 aa14.72□□□□□ -0.05
CLN6-207ENST00000566347 KLF9Q13886 244 aaPredicted RBP14.72□□□□□ -0.05
CLN6-207ENST00000566347 USF2Q15853 346 aaPredicted RBP14.72□□□□□ -0.05
CLN6-207ENST00000566347 OR1S1Q8NH92 325 aa14.72□□□□□ -0.05
CLN6-207ENST00000566347 IFNA4P05014 189 aa14.71□□□□□ -0.05
CLN6-207ENST00000566347 NUP62P37198 522 aaPredicted RBP14.71□□□□□ -0.05
CLN6-207ENST00000566347 NANOS2P60321 138 aaKnown RBP14.71□□□□□ -0.05
CLN6-207ENST00000566347 PYDC2Q56P42 97 aa14.71□□□□□ -0.05
CLN6-207ENST00000566347 TMEM128Q5BJH2 165 aa14.71□□□□□ -0.05
CLN6-207ENST00000566347 TOMM5Q8N4H5 51 aa14.71□□□□□ -0.05
CLN6-207ENST00000566347 TRIM63Q969Q1 353 aa14.71□□□□□ -0.05
CLN6-207ENST00000566347 SEPSECSQ9HD40 501 aaKnown RBP14.71□□□□□ -0.05
CLN6-207ENST00000566347 KNCNA6PVL3 124 aa14.7□□□□□ -0.06
CLN6-207ENST00000566347 GIG44P09565 113 aaPredicted RBP14.7□□□□□ -0.06
CLN6-207ENST00000566347 PSG1P11464 419 aa14.7□□□□□ -0.06
CLN6-207ENST00000566347 GPX4P36969 197 aaPredicted RBP14.7□□□□□ -0.06
CLN6-207ENST00000566347 SNRPD3P62318 126 aaKnown RBP14.7□□□□□ -0.06
CLN6-207ENST00000566347 ACTL10Q5JWF8 245 aa14.7□□□□□ -0.06
CLN6-207ENST00000566347 TMED4Q7Z7H5 227 aa14.7□□□□□ -0.06
CLN6-207ENST00000566347 DEDD2Q8WXF8 326 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms