RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TMEM170AQ8WVE7 144 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 CITED4Q96RK1 184 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 TXN2Q99757 166 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 SEC22CQ9BRL7 303 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 GAR1Q9NY12 217 aaKnown RBP10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 U3KQ87 197 aa10.2□□□□□ -0.78
VPS9D1-204ENST00000565023 STAB2Q8WWQ8 2551 aa10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 TRAV25A0A0B4J276 109 aa10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 NPY1RP25929 384 aa10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 TFPI2P48307 235 aa10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 ATP5IP56385 69 aaPredicted RBP10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 LAMTOR1Q6IAA8 161 aa10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 LINC00322Q6ZN03 302 aaPredicted RBP10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 NOXA1Q86UR1 476 aa10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 RNASEH2CQ8TDP1 164 aaKnown RBP10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 FNDC4Q9H6D8 234 aaPredicted RBP10.19□□□□□ -0.78
VPS9D1-204ENST00000565023 IGHV7-4-1A0A0J9YVY3 117 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 SYNGR2O43760 224 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 MED6O75586 246 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 LYL1P12980 280 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 OPRK1P41145 380 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 NPBWR1P48145 328 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 ID3Q02535 119 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 MLANAQ16655 118 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 C12orf45Q8N5I9 185 aaPredicted RBP10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 TMEM116Q8NCL8 245 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 OR4D5Q8NGN0 318 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 ZNF414Q96IQ9 312 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 OR10C1Q96KK4 312 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 MARVELD1Q9BSK0 173 aa10.18□□□□□ -0.78
VPS9D1-204ENST00000565023 IGHV3-66A0A0C4DH42 116 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 C15orf62A8K5M9 175 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 K7EMT4 169 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 IFNA10P01566 189 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 IAH1Q2TAA2 248 aaPredicted RBP10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 CASC10Q5T4H9 136 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 TOMM20LQ6UXN7 152 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 GBGT1Q8N5D6 347 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 CIB3Q96Q77 187 aaPredicted RBP10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 RNF2Q99496 336 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 SPAG8Q99932 426 aaPredicted RBP10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 RHPN1-AS1Q9BWJ2 59 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 GGTLC1Q9BX51 225 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 EDA2RQ9HAV5 297 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 MRPL36Q9P0J6 103 aaKnown RBP10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 SMPXQ9UHP9 88 aa10.17□□□□□ -0.78
VPS9D1-204ENST00000565023 LOC102724200A0A096LPH7 203 aaPredicted RBP10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 TRAV14DV4A0A0A6YYC5 116 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 RPS10-NUDT3A0A1W2PQS6 291 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 INMT-MINDY4F8WBC2 141 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 CHEK1O14757 476 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 TSPAN4O14817 238 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 PRAF2O60831 178 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 IAPPP10997 89 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 NKX2-1P43699 371 aaPredicted RBP10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 WFDC3Q8IUB2 231 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 ZBTB8BQ8NAP8 495 aaPredicted RBP10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 OR4X1Q8NH49 305 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 MAGT1Q9H0U3 335 aa10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 GPN1Q9HCN4 374 aaPredicted RBP10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 PUS1Q9Y606 427 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS9D1-204ENST00000565023 OR4C46A6NHA9 309 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 SNRPGP15A8MWD9 76 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 WRBO00258 174 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 CCSO14618 274 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 CLN5O75503 358 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 TMEM50AO95807 157 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 SLC25A4P12235 298 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 RPL35AP18077 110 aaKnown RBP10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 POLR2GP62487 172 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 PRSS54Q6PEW0 395 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 ZNF600Q6ZNG1 722 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 GINS3Q9BRX5 216 aa10.15□□□□□ -0.78
VPS9D1-204ENST00000565023 APOHP02749 345 aaPredicted RBP10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 IFNA4P05014 189 aa10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 RPL11P62913 178 aaKnown RBP10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 ZNF124Q15973 351 aa10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 ODF3L2Q3SX64 289 aa10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 TIGITQ495A1 244 aa10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 ETFRF1Q6IPR1 90 aa10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 TCF24Q7RTU0 167 aa10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 APRG1Q8IVJ8 170 aa10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 ST8SIA2Q92186 375 aa10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 GSKIPQ9P0R6 139 aa10.14□□□□□ -0.79
VPS9D1-204ENST00000565023 TENM2Q9NT68 2774 aa10.13□□□□□ -0.79
VPS9D1-204ENST00000565023 DNAH7Q8WXX0 4024 aa10.13□□□□□ -0.79
VPS9D1-204ENST00000565023 PTTG1O95997 202 aa10.13□□□□□ -0.79
VPS9D1-204ENST00000565023 GPX4P36969 197 aaPredicted RBP10.13□□□□□ -0.79
VPS9D1-204ENST00000565023 RAB11AP62491 216 aa10.13□□□□□ -0.79
VPS9D1-204ENST00000565023 RPP30P78346 268 aaKnown RBP10.13□□□□□ -0.79
VPS9D1-204ENST00000565023 C2orf50Q96LR7 162 aa10.13□□□□□ -0.79
VPS9D1-204ENST00000565023 ZFAND3Q9H8U3 227 aa10.13□□□□□ -0.79
VPS9D1-204ENST00000565023 TRAV30A0A087WSZ9 112 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 C5orf51A6NDU8 294 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 FAM25EA8MYX2 175 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 SSSCA1O60232 199 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 SCGB1D2O95969 90 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 IGKV1-17P01599 117 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 MBPP02686 304 aaPredicted RBP10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 IGLC1P0CG04 106 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms