RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 NPY1RP25929 384 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 TFPI2P48307 235 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 INPP1P49441 399 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 PMS2P11Q13670 270 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 MLANAQ16655 118 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 TMEM128Q5BJH2 165 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 SLC25A21Q9BQT8 299 aaPredicted RBP13.66□□□□□ -0.22
CLN6-204ENST00000564752 SRRQ9GZT4 340 aa13.66□□□□□ -0.22
CLN6-204ENST00000564752 TRAV30A0A087WSZ9 112 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 CD5P06127 495 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 SLC25A4P12235 298 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 ATF4P18848 351 aaPredicted RBP13.65□□□□□ -0.22
CLN6-204ENST00000564752 TCF24Q7RTU0 167 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 NOXA1Q86UR1 476 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 DTD1Q8TEA8 209 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 ST8SIA2Q92186 375 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 TMEM231Q9H6L2 316 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 MAP6D1Q9H9H5 199 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 HSPB7Q9UBY9 170 aa13.65□□□□□ -0.22
CLN6-204ENST00000564752 IGHV3-66A0A0C4DH42 116 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 NUPR2A6NF83 97 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 IFNA10P01566 189 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 RPL35AP18077 110 aaKnown RBP13.64□□□□□ -0.23
CLN6-204ENST00000564752 RND2P52198 227 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 PAFAH1B2P68402 229 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 TIGITQ495A1 244 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 TRIQKQ629K1 86 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 FAM90A2PQ658T7 463 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 ETFRF1Q6IPR1 90 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 CEMP1Q6PRD7 247 aaPredicted RBP13.64□□□□□ -0.23
CLN6-204ENST00000564752 OR1S1Q8NH92 325 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 METTL26Q96S19 204 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 VSIRQ9H7M9 311 aa13.64□□□□□ -0.23
CLN6-204ENST00000564752 IGKV1-17P01599 117 aa13.63□□□□□ -0.23
CLN6-204ENST00000564752 APOHP02749 345 aaPredicted RBP13.63□□□□□ -0.23
CLN6-204ENST00000564752 RBMS2Q15434 407 aaKnown RBP13.63□□□□□ -0.23
CLN6-204ENST00000564752 PRSS54Q6PEW0 395 aa13.63□□□□□ -0.23
CLN6-204ENST00000564752 CENPSQ8N2Z9 138 aa13.63□□□□□ -0.23
CLN6-204ENST00000564752 GBGT1Q8N5D6 347 aa13.63□□□□□ -0.23
CLN6-204ENST00000564752 OR1S2Q8NGQ3 325 aa13.63□□□□□ -0.23
CLN6-204ENST00000564752 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
CLN6-204ENST00000564752 RBKSQ9H477 322 aa13.63□□□□□ -0.23
CLN6-204ENST00000564752 A0A1W2PS18 150 aa13.62□□□□□ -0.23
CLN6-204ENST00000564752 LY6G6CO95867 125 aa13.62□□□□□ -0.23
CLN6-204ENST00000564752 IGLC1P0CG04 106 aa13.62□□□□□ -0.23
CLN6-204ENST00000564752 NPPCP23582 126 aa13.62□□□□□ -0.23
CLN6-204ENST00000564752 CMC4P56277 68 aaPredicted RBP13.62□□□□□ -0.23
CLN6-204ENST00000564752 RPL11P62913 178 aaKnown RBP13.62□□□□□ -0.23
CLN6-204ENST00000564752 APRG1Q8IVJ8 170 aa13.62□□□□□ -0.23
CLN6-204ENST00000564752 NARS2Q96I59 477 aaKnown RBP13.62□□□□□ -0.23
CLN6-204ENST00000564752 U3KQ87 197 aa13.62□□□□□ -0.23
CLN6-204ENST00000564752 DFFBO76075 338 aa13.61□□□□□ -0.23
CLN6-204ENST00000564752 SFT2D2O95562 160 aa13.61□□□□□ -0.23
CLN6-204ENST00000564752 OR10J1P30954 320 aa13.61□□□□□ -0.23
CLN6-204ENST00000564752 PPP1R1AQ13522 171 aa13.61□□□□□ -0.23
CLN6-204ENST00000564752 LRTM2Q8N967 370 aa13.61□□□□□ -0.23
CLN6-204ENST00000564752 ACY3Q96HD9 319 aa13.61□□□□□ -0.23
CLN6-204ENST00000564752 FRAS1Q86XX4 4008 aa13.61□□□□□ -0.23
CLN6-204ENST00000564752 DNASE2O00115 360 aaPredicted RBP13.6□□□□□ -0.23
CLN6-204ENST00000564752 ZNF124Q15973 351 aa13.6□□□□□ -0.23
CLN6-204ENST00000564752 BAK1Q16611 211 aa13.6□□□□□ -0.23
CLN6-204ENST00000564752 LILRB2Q8N423 598 aa13.6□□□□□ -0.23
CLN6-204ENST00000564752 TMEM217Q8N7C4 229 aa13.6□□□□□ -0.23
CLN6-204ENST00000564752 Q8WTZ3 238 aa13.6□□□□□ -0.23
CLN6-204ENST00000564752 CSTL1Q9H114 145 aa13.6□□□□□ -0.23
CLN6-204ENST00000564752 MS4A6AQ9H2W1 248 aa13.6□□□□□ -0.23
CLN6-204ENST00000564752 NAP1L6A6NFF2 107 aa13.59□□□□□ -0.23
CLN6-204ENST00000564752 IFNA4P05014 189 aa13.59□□□□□ -0.23
CLN6-204ENST00000564752 CRYBB3P26998 211 aa13.59□□□□□ -0.23
CLN6-204ENST00000564752 YPEL3P61236 119 aaPredicted RBP13.59□□□□□ -0.23
CLN6-204ENST00000564752 NPIPB3Q92617 1050 aa13.59□□□□□ -0.23
CLN6-204ENST00000564752 GRAMD2BQ96HH9 432 aa13.59□□□□□ -0.23
CLN6-204ENST00000564752 KRTAP17-1Q9BYP8 105 aa13.59□□□□□ -0.23
CLN6-204ENST00000564752 KLK5Q9Y337 293 aaPredicted RBP13.59□□□□□ -0.23
CLN6-204ENST00000564752 TMED3Q9Y3Q3 217 aa13.59□□□□□ -0.23
CLN6-204ENST00000564752 TRAV2A0A0B4J234 112 aa13.58□□□□□ -0.24
CLN6-204ENST00000564752 PITX3O75364 302 aa13.58□□□□□ -0.24
CLN6-204ENST00000564752 SLC25A6P12236 298 aa13.58□□□□□ -0.24
CLN6-204ENST00000564752 P2RY1P47900 373 aa13.58□□□□□ -0.24
CLN6-204ENST00000564752 ATP5IP56385 69 aaPredicted RBP13.58□□□□□ -0.24
CLN6-204ENST00000564752 UBE2MP61081 183 aaKnown RBP13.58□□□□□ -0.24
CLN6-204ENST00000564752 RABAC1Q9UI14 185 aa13.58□□□□□ -0.24
CLN6-204ENST00000564752 LINC00854A0A1B0GVQ3 168 aa13.57□□□□□ -0.24
CLN6-204ENST00000564752 MPTX1A8MV57 137 aa13.57□□□□□ -0.24
CLN6-204ENST00000564752 FAM90A26D6RGX4 464 aa13.57□□□□□ -0.24
CLN6-204ENST00000564752 NDUFB6O95139 128 aa13.57□□□□□ -0.24
CLN6-204ENST00000564752 IL4P05112 153 aa13.57□□□□□ -0.24
CLN6-204ENST00000564752 HNRNPCP07910 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLN6-204ENST00000564752 IAPPP10997 89 aa13.57□□□□□ -0.24
CLN6-204ENST00000564752 STXBP6Q8NFX7 210 aa13.57□□□□□ -0.24
CLN6-204ENST00000564752 GATAD1Q8WUU5 269 aa13.57□□□□□ -0.24
CLN6-204ENST00000564752 NDUFA13Q9P0J0 144 aa13.57□□□□□ -0.24
CLN6-204ENST00000564752 CENPXA8MT69 81 aa13.56□□□□□ -0.24
CLN6-204ENST00000564752 MED6O75586 246 aa13.56□□□□□ -0.24
CLN6-204ENST00000564752 TOMM40O96008 361 aa13.56□□□□□ -0.24
CLN6-204ENST00000564752 HOXB5P09067 269 aa13.56□□□□□ -0.24
CLN6-204ENST00000564752 EIF2B2P49770 351 aaKnown RBP13.56□□□□□ -0.24
CLN6-204ENST00000564752 PHLDA1Q8WV24 401 aaPredicted RBP13.56□□□□□ -0.24
CLN6-204ENST00000564752 SLC35E1Q96K37 410 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms