RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ZNF835Q9Y2P0 537 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 IZUMO1RA6ND01 250 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 F2RL2O00254 374 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 ISLRO14498 428 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 C17orf58Q2M2W7 97 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 COX19Q49B96 90 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 ZCCHC24Q8N2G6 241 aaKnown RBP9.64□□□□□ -0.87
ABCA3-203ENST00000563623 OR1B1Q8NGR6 318 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 OR10X1Q8NGY0 326 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 PRCDQ00LT1 54 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 DEFB109BQ30KR1 87 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 FAM90A1Q86YD7 464 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 DAZAP1Q96EP5 407 aaKnown RBP9.64□□□□□ -0.87
ABCA3-203ENST00000563623 OR8B2Q96RD0 313 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 SLC25A33Q9BSK2 321 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 LY96Q9Y6Y9 160 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 IGHV3-72A0A0B4J1Y9 119 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 SH2D7A6NKC9 451 aaPredicted RBP9.64□□□□□ -0.87
ABCA3-203ENST00000563623 PRR33A8MZF0 331 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 MOSP00540 346 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 CSN3P07498 182 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 IGLC2P0DOY2 106 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 IGLC3P0DOY3 106 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 PPOXP50336 477 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 HCP5Q6MZN7 132 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 TCF24Q7RTU0 167 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 ZNF503Q96F45 646 aa9.64□□□□□ -0.87
ABCA3-203ENST00000563623 MRPL20Q9BYC9 149 aaKnown RBP9.64□□□□□ -0.87
ABCA3-203ENST00000563623 APC2O95996 2303 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 CORTO00230 105 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 SSBP2P81877 361 aaPredicted RBP9.63□□□□□ -0.87
ABCA3-203ENST00000563623 SMAGPQ0VAQ4 97 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 AMMECR1LQ6DCA0 310 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 WASHC3Q9Y3C0 194 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 DSCAMO60469 2012 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 PGPA6NDG6 321 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 HIGD1CA8MV81 97 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 CCL3L1P16619 93 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 PEAR1Q5VY43 1037 aaPredicted RBP9.63□□□□□ -0.87
ABCA3-203ENST00000563623 OR1L8Q8NGR8 309 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 C18orf32Q8TCD1 76 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 A0A1B0GV72 72 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 CT45A6P0DMU7 189 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 CT45A5P0DMU8 189 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 CT45A7P0DMV0 189 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 CD59P13987 128 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 CD69Q07108 199 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 DDB2Q92466 427 aa9.63□□□□□ -0.87
ABCA3-203ENST00000563623 DYSFO75923 2080 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 TRAV17A0A0B4J275 112 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 A0A1W2PRE2 83 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 PEX7O00628 323 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 ESDP10768 282 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 RPL24P83731 157 aaKnown RBP9.62□□□□□ -0.87
ABCA3-203ENST00000563623 TBR1Q16650 682 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 MBNL2Q5VZF2 373 aaKnown RBP9.62□□□□□ -0.87
ABCA3-203ENST00000563623 C19orf35Q6ZS72 473 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 PDPNQ86YL7 162 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 TPPP3Q9BW30 176 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 DMDP11532 3685 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 SAP30O75446 220 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 RNASE2P10153 161 aaKnown RBP9.62□□□□□ -0.87
ABCA3-203ENST00000563623 MRPL52Q86TS9 123 aaKnown RBP9.62□□□□□ -0.87
ABCA3-203ENST00000563623 NUP35Q8NFH5 326 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 TMEM186Q96B77 213 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 DLL1O00548 723 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 PRB3Q04118 309 aaPredicted RBP9.62□□□□□ -0.87
ABCA3-203ENST00000563623 FLYWCH2Q96CP2 140 aaKnown RBP9.62□□□□□ -0.87
ABCA3-203ENST00000563623 MCRIP2Q9BUT9 160 aaKnown RBP9.62□□□□□ -0.87
ABCA3-203ENST00000563623 SAP30LQ9HAJ7 183 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 ZNF71Q9NQZ8 489 aaPredicted RBP9.62□□□□□ -0.87
ABCA3-203ENST00000563623 ACACAQ13085 2346 aa9.62□□□□□ -0.87
ABCA3-203ENST00000563623 TRAV30A0A087WSZ9 112 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 hADV38S2A0JD32 116 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 LINC00305Q7Z4B0 112 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 GAGE12BA1L429 117 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 CHEK1O14757 476 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 SLC25A17O43808 307 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 SUB1P53999 127 aaKnown RBP eCLIP9.61□□□□□ -0.87
ABCA3-203ENST00000563623 SPACA3Q8IXA5 215 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 C1orf162Q8NEQ5 155 aaPredicted RBP9.61□□□□□ -0.87
ABCA3-203ENST00000563623 OR1L4Q8NGR5 311 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 GTSF1LQ9H1H1 148 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 TP73-AS1Q9UF72 201 aa9.61□□□□□ -0.87
ABCA3-203ENST00000563623 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
ABCA3-203ENST00000563623 IGLV2-8P01709 118 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 HIST1H1EP10412 219 aaKnown RBP9.6□□□□□ -0.87
ABCA3-203ENST00000563623 TSPOP30536 169 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 GTF2H5Q6ZYL4 71 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 WNK2Q9Y3S1 2297 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 IGHV2-70DA0A0C4DH43 119 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 RPRMLQ8N4K4 120 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
ABCA3-203ENST00000563623 OR1N2Q8NGR9 330 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 CCL17Q92583 94 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 PMCHL2Q9BQD1 86 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 SLC25A15Q9Y619 301 aa9.6□□□□□ -0.87
ABCA3-203ENST00000563623 SMIM27A0A1W2PRY6 76 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms