RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 TMEM231Q9H6L2 316 aa10.4□□□□□ -0.74
SMPD3-204ENST00000563396 IGHV3OR16-13A0A075B7E8 117 aa10.39□□□□□ -0.75
SMPD3-204ENST00000563396 IGHV3-74A0A0B4J1X5 117 aa10.39□□□□□ -0.75
SMPD3-204ENST00000563396 AKR1C4P17516 323 aa10.39□□□□□ -0.75
SMPD3-204ENST00000563396 CMC4P56277 68 aaPredicted RBP10.39□□□□□ -0.75
SMPD3-204ENST00000563396 MLANAQ16655 118 aa10.39□□□□□ -0.75
SMPD3-204ENST00000563396 NOXA1Q86UR1 476 aa10.39□□□□□ -0.75
SMPD3-204ENST00000563396 LILRB2Q8N423 598 aa10.39□□□□□ -0.75
SMPD3-204ENST00000563396 OR1S2Q8NGQ3 325 aa10.39□□□□□ -0.75
SMPD3-204ENST00000563396 SRRQ9GZT4 340 aa10.39□□□□□ -0.75
SMPD3-204ENST00000563396 A0A1W2PS18 150 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 PITX3O75364 302 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 RND2P52198 227 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 YPEL3P61236 119 aaPredicted RBP10.38□□□□□ -0.75
SMPD3-204ENST00000563396 PAFAH1B2P68402 229 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 DEFB135Q30KP9 77 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 TIGITQ495A1 244 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 ETFRF1Q6IPR1 90 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 APRG1Q8IVJ8 170 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 DTD1Q8TEA8 209 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 METTL26Q96S19 204 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 MS4A6AQ9H2W1 248 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 U3KQE9 123 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 DNAH1Q9P2D7 4330 aa10.38□□□□□ -0.75
SMPD3-204ENST00000563396 DFFBO76075 338 aa10.37□□□□□ -0.75
SMPD3-204ENST00000563396 NXPH3O95157 252 aa10.37□□□□□ -0.75
SMPD3-204ENST00000563396 SLC25A6P12236 298 aa10.37□□□□□ -0.75
SMPD3-204ENST00000563396 ATF4P18848 351 aaPredicted RBP10.37□□□□□ -0.75
SMPD3-204ENST00000563396 ATP5IP56385 69 aaPredicted RBP10.37□□□□□ -0.75
SMPD3-204ENST00000563396 SPANXN2Q5MJ10 180 aa10.37□□□□□ -0.75
SMPD3-204ENST00000563396 TMED4Q7Z7H5 227 aa10.37□□□□□ -0.75
SMPD3-204ENST00000563396 RNF183Q96D59 192 aa10.37□□□□□ -0.75
SMPD3-204ENST00000563396 RBKSQ9H477 322 aa10.37□□□□□ -0.75
SMPD3-204ENST00000563396 U3KQ87 197 aa10.37□□□□□ -0.75
SMPD3-204ENST00000563396 IGKV3-7A0A075B6H7 116 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 IGHV3-66A0A0C4DH42 116 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 FAM90A26D6RGX4 464 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 SPRY2O43597 315 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 NPPCP23582 126 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 OR10J1P30954 320 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 P2RY1P47900 373 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 TFPI2P48307 235 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 UBE2MP61081 183 aaKnown RBP10.36□□□□□ -0.75
SMPD3-204ENST00000563396 RBMS2Q15434 407 aaKnown RBP10.36□□□□□ -0.75
SMPD3-204ENST00000563396 ZNF124Q15973 351 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 STPG3Q8N7X2 389 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 GRAMD2BQ96HH9 432 aa10.36□□□□□ -0.75
SMPD3-204ENST00000563396 K7EQG2 157 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 SFT2D2O95562 160 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 TOMM40O96008 361 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 VAMP1P23763 118 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 PPP1R1AQ13522 171 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 PLECQ15149 4684 aaKnown RBP10.35□□□□□ -0.75
SMPD3-204ENST00000563396 USF2Q15853 346 aaPredicted RBP10.35□□□□□ -0.75
SMPD3-204ENST00000563396 CENPSQ8N2Z9 138 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 GBGT1Q8N5D6 347 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 FAM24BQ8N5W8 94 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 DCANP1Q8TF63 244 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 GLMPQ8WWB7 406 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 TMED3Q9Y3Q3 217 aa10.35□□□□□ -0.75
SMPD3-204ENST00000563396 IFNA10P01566 189 aa10.34□□□□□ -0.75
SMPD3-204ENST00000563396 HNRNPCP07910 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMPD3-204ENST00000563396 RPL35AP18077 110 aaKnown RBP10.34□□□□□ -0.75
SMPD3-204ENST00000563396 LYG2Q86SG7 212 aa10.34□□□□□ -0.75
SMPD3-204ENST00000563396 OR1S1Q8NH92 325 aa10.34□□□□□ -0.75
SMPD3-204ENST00000563396 Q8WTZ3 238 aa10.34□□□□□ -0.75
SMPD3-204ENST00000563396 NPIPB3Q92617 1050 aa10.34□□□□□ -0.75
SMPD3-204ENST00000563396 NARS2Q96I59 477 aaKnown RBP10.34□□□□□ -0.75
SMPD3-204ENST00000563396 ALMS1Q8TCU4 4167 aa10.34□□□□□ -0.75
SMPD3-204ENST00000563396 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
SMPD3-204ENST00000563396 NAP1L6A6NFF2 107 aa10.33□□□□□ -0.76
SMPD3-204ENST00000563396 IL4P05112 153 aa10.33□□□□□ -0.76
SMPD3-204ENST00000563396 DEFB131AP59861 70 aa10.33□□□□□ -0.76
SMPD3-204ENST00000563396 BAK1Q16611 211 aa10.33□□□□□ -0.76
SMPD3-204ENST00000563396 C16orf54Q6UWD8 224 aa10.33□□□□□ -0.76
SMPD3-204ENST00000563396 GATAD1Q8WUU5 269 aa10.33□□□□□ -0.76
SMPD3-204ENST00000563396 ACY3Q96HD9 319 aa10.33□□□□□ -0.76
SMPD3-204ENST00000563396 SDHCQ99643 169 aaPredicted RBP10.33□□□□□ -0.76
SMPD3-204ENST00000563396 CSTL1Q9H114 145 aa10.33□□□□□ -0.76
SMPD3-204ENST00000563396 IGKV1D-37A0A075B6S9 117 aa10.32□□□□□ -0.76
SMPD3-204ENST00000563396 HELTA6NFD8 242 aa10.32□□□□□ -0.76
SMPD3-204ENST00000563396 MPTX1A8MV57 137 aa10.32□□□□□ -0.76
SMPD3-204ENST00000563396 DNASE2O00115 360 aaPredicted RBP10.32□□□□□ -0.76
SMPD3-204ENST00000563396 NDUFB6O95139 128 aa10.32□□□□□ -0.76
SMPD3-204ENST00000563396 BTCP35070 178 aa10.32□□□□□ -0.76
SMPD3-204ENST00000563396 GPX4P36969 197 aaPredicted RBP10.32□□□□□ -0.76
SMPD3-204ENST00000563396 EWSR1Q01844 656 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMPD3-204ENST00000563396 TRIQKQ629K1 86 aa10.32□□□□□ -0.76
SMPD3-204ENST00000563396 STXBP6Q8NFX7 210 aa10.32□□□□□ -0.76
SMPD3-204ENST00000563396 RABAC1Q9UI14 185 aa10.32□□□□□ -0.76
SMPD3-204ENST00000563396 PRSS46E5RG02 174 aa10.31□□□□□ -0.76
SMPD3-204ENST00000563396 BUB3O43684 328 aa10.31□□□□□ -0.76
SMPD3-204ENST00000563396 IFNA4P05014 189 aa10.31□□□□□ -0.76
SMPD3-204ENST00000563396 PSG1P11464 419 aa10.31□□□□□ -0.76
SMPD3-204ENST00000563396 NUP62P37198 522 aaPredicted RBP10.31□□□□□ -0.76
SMPD3-204ENST00000563396 EIF2B2P49770 351 aaKnown RBP10.31□□□□□ -0.76
SMPD3-204ENST00000563396 RPL11P62913 178 aaKnown RBP10.31□□□□□ -0.76
SMPD3-204ENST00000563396 LEMD1Q68G75 181 aa10.31□□□□□ -0.76
SMPD3-204ENST00000563396 OR8G2PQ6IF36 304 aa10.31□□□□□ -0.76
SMPD3-204ENST00000563396 TRPT1Q86TN4 253 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms