RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 SUPT4H1P63272 117 aaKnown RBP11.54□□□□□ -0.56
SF3B3-203ENST00000562874 C2orf83Q53S99 150 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 RABL2AQ9UBK7 228 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-203ENST00000562874 RSL24D1Q9UHA3 163 aaKnown RBP11.54□□□□□ -0.56
SF3B3-203ENST00000562874 SCP2D1Q9UJQ7 156 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 RABL2BQ9UNT1 228 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 FABP12A6NFH5 140 aa11.53□□□□□ -0.56
SF3B3-203ENST00000562874 DEFB4AO15263 64 aa11.53□□□□□ -0.56
SF3B3-203ENST00000562874 SCGB2A1O75556 95 aa11.53□□□□□ -0.56
SF3B3-203ENST00000562874 ZNF688P0C7X2 276 aa11.53□□□□□ -0.56
SF3B3-203ENST00000562874 CRYBB3P26998 211 aa11.53□□□□□ -0.56
SF3B3-203ENST00000562874 OR10J1P30954 320 aa11.53□□□□□ -0.56
SF3B3-203ENST00000562874 CMC4P56277 68 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-203ENST00000562874 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
SF3B3-203ENST00000562874 OR1S2Q8NGQ3 325 aa11.53□□□□□ -0.56
SF3B3-203ENST00000562874 ACY3Q96HD9 319 aa11.53□□□□□ -0.56
SF3B3-203ENST00000562874 A0A1W2PS18 150 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 K7EQG2 157 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 LY6G6CO95867 125 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 CD5P06127 495 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 USF2Q15853 346 aaPredicted RBP11.52□□□□□ -0.57
SF3B3-203ENST00000562874 NMSQ5H8A3 153 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 TMED4Q7Z7H5 227 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 OR11H2Q8NH07 326 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 RNASEH2CQ8TDP1 164 aaKnown RBP11.52□□□□□ -0.57
SF3B3-203ENST00000562874 IL22RA2Q969J5 263 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 TRIM63Q969Q1 353 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 RARRES2Q99969 163 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 SOSTQ9BQB4 213 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 RBKSQ9H477 322 aa11.52□□□□□ -0.57
SF3B3-203ENST00000562874 TRAV30A0A087WSZ9 112 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 TRAV2A0A0B4J234 112 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 CCDC160A6NGH7 325 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 KNCNA6PVL3 124 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 IFNA10P01566 189 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 IL4P05112 153 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 KLF9Q13886 244 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-203ENST00000562874 SMCO1Q147U7 214 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 CEMP1Q6PRD7 247 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-203ENST00000562874 STHQ8IWL8 128 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 NPIPB3Q92617 1050 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
SF3B3-203ENST00000562874 KCNIP3Q9Y2W7 256 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 V9GYH0 126 aa11.51□□□□□ -0.57
SF3B3-203ENST00000562874 A0A0B4J2A0 478 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 HNRNPCP07910 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
SF3B3-203ENST00000562874 SLC25A4P12235 298 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 C4BPBP20851 252 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 NANOS2P60321 138 aaKnown RBP11.5□□□□□ -0.57
SF3B3-203ENST00000562874 ZNF79Q15937 498 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 PYDC2Q56P42 97 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 TMEM217Q8N7C4 229 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 DTD1Q8TEA8 209 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 DCANP1Q8TF63 244 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 GATAD1Q8WUU5 269 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 GLMPQ8WWB7 406 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 GRAMD2BQ96HH9 432 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 SCGB3A2Q96PL1 93 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 HSPB7Q9UBY9 170 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 FBXL17Q9UF56 701 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 SHPKQ9UHJ6 478 aa11.5□□□□□ -0.57
SF3B3-203ENST00000562874 BIRC6Q9NR09 4857 aa11.49□□□□□ -0.57
SF3B3-203ENST00000562874 CCR6P51684 374 aa11.49□□□□□ -0.57
SF3B3-203ENST00000562874 DHRS2Q13268 280 aa11.49□□□□□ -0.57
SF3B3-203ENST00000562874 TRPT1Q86TN4 253 aaKnown RBP11.49□□□□□ -0.57
SF3B3-203ENST00000562874 LGI3Q8N145 548 aa11.49□□□□□ -0.57
SF3B3-203ENST00000562874 OR1S1Q8NH92 325 aa11.49□□□□□ -0.57
SF3B3-203ENST00000562874 Q8WTZ3 238 aa11.49□□□□□ -0.57
SF3B3-203ENST00000562874 PHLDA1Q8WV24 401 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-203ENST00000562874 U3KQE9 123 aa11.49□□□□□ -0.57
SF3B3-203ENST00000562874 TOMM40O96008 361 aa11.48□□□□□ -0.57
SF3B3-203ENST00000562874 IAPPP10997 89 aa11.48□□□□□ -0.57
SF3B3-203ENST00000562874 ANXA3P12429 323 aa11.48□□□□□ -0.57
SF3B3-203ENST00000562874 VAMP1P23763 118 aa11.48□□□□□ -0.57
SF3B3-203ENST00000562874 FAUP35544 74 aaKnown RBP11.48□□□□□ -0.57
SF3B3-203ENST00000562874 YPEL3P61236 119 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-203ENST00000562874 PSMG4Q5JS54 123 aa11.48□□□□□ -0.57
SF3B3-203ENST00000562874 ACTL10Q5JWF8 245 aa11.48□□□□□ -0.57
SF3B3-203ENST00000562874 ETFRF1Q6IPR1 90 aa11.48□□□□□ -0.57
SF3B3-203ENST00000562874 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
SF3B3-203ENST00000562874 TOMM5Q8N4H5 51 aa11.48□□□□□ -0.57
SF3B3-203ENST00000562874 C11orf68Q9H3H3 251 aaKnown RBP11.48□□□□□ -0.57
SF3B3-203ENST00000562874 GIG44P09565 113 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-203ENST00000562874 PSG1P11464 419 aa11.47□□□□□ -0.57
SF3B3-203ENST00000562874 ATF4P18848 351 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-203ENST00000562874 GSG1LQ6UXU4 331 aa11.47□□□□□ -0.57
SF3B3-203ENST00000562874 OR51G1Q8NGK1 321 aa11.47□□□□□ -0.57
SF3B3-203ENST00000562874 PBDC1Q9BVG4 233 aa11.47□□□□□ -0.57
SF3B3-203ENST00000562874 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
SF3B3-203ENST00000562874 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-203ENST00000562874 HELTA6NFD8 242 aa11.46□□□□□ -0.57
SF3B3-203ENST00000562874 IFNA4P05014 189 aa11.46□□□□□ -0.57
SF3B3-203ENST00000562874 SRPXP78539 464 aa11.46□□□□□ -0.57
SF3B3-203ENST00000562874 C11orf45Q8TAV5 145 aa11.46□□□□□ -0.57
SF3B3-203ENST00000562874 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.57
SF3B3-203ENST00000562874 RD3LP0DJH9 198 aa11.45□□□□□ -0.58
SF3B3-203ENST00000562874 EIF2B2P49770 351 aaKnown RBP11.45□□□□□ -0.58
SF3B3-203ENST00000562874 ZNF90Q03938 601 aa11.45□□□□□ -0.58
SF3B3-203ENST00000562874 SIGLEC15Q6ZMC9 328 aa11.45□□□□□ -0.58
SF3B3-203ENST00000562874 NOXA1Q86UR1 476 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms