RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 ATRXP46100 2492 aa17■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 LGALS4P56470 323 aa17■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 SUMO1P63165 101 aaKnown RBP17■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 MORN5Q5VZ52 161 aa17■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 LINC00305Q7Z4B0 112 aa17■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 LHFPL4Q7Z7J7 247 aa17■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 HYPMO75409 117 aa17■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 PLP1P60201 277 aa17■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 NCOR2Q9Y618 2525 aa16.99■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 TRAV9-1A0A075B6T8 112 aa16.99■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 ORM2P19652 201 aa16.99■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 ZFP36P26651 326 aaKnown RBP16.99■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 HES1Q14469 280 aa16.99■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 TIGITQ495A1 244 aa16.99■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 CENPWQ5EE01 88 aa16.99■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 OR1B1Q8NGR6 318 aa16.99■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 WNT10AQ9GZT5 417 aa16.99■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 SMG1Q96Q15 3661 aaKnown RBP16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 C19orf84I3L1E1 186 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 I3L2K1 104 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 NDUFS7O75251 213 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 FABP1P07148 127 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 HOXB4P17483 251 aaPredicted RBP16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 HNF1AP20823 631 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 FXYD3Q14802 87 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 C19orf35Q6ZS72 473 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 SGMS2Q8NHU3 365 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 SIRPDQ9H106 197 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 ABCA4P78363 2273 aa16.98■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 K7EN84 100 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 GOSR1O95249 250 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 CLEC12BQ2HXU8 276 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 C5orf64Q2M2E5 130 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 PITPNC1Q9UKF7 332 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 DMRT1Q9Y5R6 373 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 CACNA1AO00555 2505 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 IGHV2-70DA0A0C4DH43 119 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 A0A1W2PRD5 423 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 A0A1W2PRF3 423 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 A0A1W2PRM7 423 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 PYYP10082 97 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 S100A2P29034 98 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 FXYD5Q96DB9 178 aa16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 TBL2Q9Y4P3 447 aaKnown RBP16.97■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 IGHV3-21A0A0B4J1V1 117 aa16.96■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 TAS2R60P59551 318 aa16.96■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 ACTL10Q5JWF8 245 aa16.96■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 RUSC1-AS1Q66K80 236 aa16.96■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 IL36BQ9NZH7 164 aa16.96■□□□□ 0.31
VPS9D1-AS1-202ENST00000562866 A0A0U1RQK1 487 aa16.95■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 ZNF320A2RRD8 509 aa16.95■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 IGLC1P0CG04 106 aa16.95■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 GAR1Q9NY12 217 aaKnown RBP16.95■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 OVOL3O00110 214 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 TOX4O94842 621 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 CNN1P51911 297 aaKnown RBP16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 ERVFC1-1P60608 527 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 EBI3Q14213 229 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 ZNF329Q86UD4 541 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 CDC42EP3Q9UKI2 254 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 HIGD1AQ9Y241 93 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 COL6A6A6NMZ7 2263 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 TPRP12270 2363 aaKnown RBP16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 ZNF562Q6V9R5 426 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 Q8N6K4 173 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 RASL11BQ9BPW5 248 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 NAV3Q8IVL0 2385 aa16.94■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 GCGP01275 180 aa16.93■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 UBE2E1P51965 193 aa16.93■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 HIST3H2BBQ8N257 126 aa16.93■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 IGF2BP2-AS1Q96M15 143 aa16.93■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 OSTCQ9NRP0 149 aa16.93■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 NPIPB5A8MRT5 1133 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 CD24P25063 80 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 ARPC1AQ92747 370 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 PEX7O00628 323 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 PSG1P11464 419 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 PDLIM4P50479 330 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 LMO4P61968 165 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 RPEL1Q2QD12 228 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 DYNAPQ8N1N2 210 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 BPESC1Q9GZL8 116 aa16.92■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 NBASA2RRP1 2371 aa16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 PCP4L1A6NKN8 68 aa16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 IFITM10A6NMD0 228 aa16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 NCBP2LA6PVI3 153 aaKnown RBP16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 K7EIM0 57 aa16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 ISLRO14498 428 aa16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 TMEM11P17152 192 aa16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 S100A12P80511 92 aa16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 RPL19P84098 196 aaKnown RBP16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 C1RLQ9NZP8 487 aa16.91■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 FAM106CPP0CH98 169 aa16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 RD3LP0DJH9 198 aa16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 MYCNOSP40205 109 aa16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 RPL15P61313 204 aaKnown RBP16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 LYZP61626 148 aa16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 OR5I1Q13606 314 aa16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 COA6Q5JTJ3 125 aaKnown RBP16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 TMEM183AQ8IXX5 376 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms