RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 RORCP51449 518 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 RND2P52198 227 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 LINC00336Q6ZUF6 198 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 AP3S1Q92572 193 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 C1QTNF4Q9BXJ3 329 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.38□□□□□ -0.91
SF3B3-202ENST00000562722 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 EXTL2Q9UBQ6 330 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 CELA1Q9UNI1 258 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 TEX13DA0A0J9YY54 714 aaPredicted RBP9.37□□□□□ -0.91
SF3B3-202ENST00000562722 B3GALNT1O75752 331 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 RAB3DO95716 219 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 IL4P05112 153 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 OR5AC1P0C628 307 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 IGLC1P0CG04 106 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 SLC25A4P12235 298 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 NPY1RP25929 384 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 TAS2R19P59542 299 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 DHODHQ02127 395 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 C12orf74Q32Q52 190 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 BSXQ3C1V8 233 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 PRSS54Q6PEW0 395 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 C16orf54Q6UWD8 224 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 Q6ZRM9 215 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 FAM219AQ8IW50 185 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 CSNK1G2-AS1Q8NCQ2 148 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 SLC24A4Q8NFF2 622 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 OR4D10Q8NGI6 311 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 TERB2Q8NHR7 220 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 MARCH1Q8TCQ1 289 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 GLMPQ8WWB7 406 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 NDUFAF3Q9BU61 184 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 CACNG5Q9UF02 275 aa9.37□□□□□ -0.91
SF3B3-202ENST00000562722 C14orf166Q9Y224 244 aaKnown RBP9.37□□□□□ -0.91
SF3B3-202ENST00000562722 FAM90A26D6RGX4 464 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 NXPH3O95157 252 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 AMBPP02760 352 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 P0DMU3 169 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 FAM231AP0DMU4 169 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 FAM231CP0DMU5 169 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 EMP1P54849 157 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 ETFRF1Q6IPR1 90 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 OR52E5Q8NH55 327 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 RNASEH2CQ8TDP1 164 aaKnown RBP9.36□□□□□ -0.91
SF3B3-202ENST00000562722 ACY3Q96HD9 319 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 TMEM222Q9H0R3 208 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 NRN1Q9NPD7 142 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 MTFP1Q9UDX5 166 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 U3KQE9 123 aa9.36□□□□□ -0.91
SF3B3-202ENST00000562722 M0R2N4 97 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 GSTZ1O43708 216 aaPredicted RBP9.35□□□□□ -0.91
SF3B3-202ENST00000562722 RD3LP0DJH9 198 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 YPEL3P61236 119 aaPredicted RBP9.35□□□□□ -0.91
SF3B3-202ENST00000562722 USF2Q15853 346 aaPredicted RBP9.35□□□□□ -0.91
SF3B3-202ENST00000562722 C2orf83Q53S99 150 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 TMEM268Q5VZI3 342 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 STEAP1BQ6NZ63 245 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 SIGLEC15Q6ZMC9 328 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 POM121L12Q8N7R1 296 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 TMEM229BQ8NBD8 167 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 C15orf40Q8WUR7 153 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 NPIPB3Q92617 1050 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 RBPMSQ93062 196 aaKnown RBP9.35□□□□□ -0.91
SF3B3-202ENST00000562722 NAA60Q9H7X0 242 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 AGRNO00468 2067 aa9.35□□□□□ -0.91
SF3B3-202ENST00000562722 IGHV3OR16-12A0A075B7B8 117 aa9.34□□□□□ -0.91
SF3B3-202ENST00000562722 CDS2O95674 445 aa9.34□□□□□ -0.91
SF3B3-202ENST00000562722 IGKV3-20P01619 116 aa9.34□□□□□ -0.91
SF3B3-202ENST00000562722 MEF2DQ14814 521 aa9.34□□□□□ -0.91
SF3B3-202ENST00000562722 FAAP20Q6NZ36 180 aa9.34□□□□□ -0.91
SF3B3-202ENST00000562722 UBE2DNLQ8IWF7 75 aa9.34□□□□□ -0.91
SF3B3-202ENST00000562722 SELENOHQ8IZQ5 122 aaKnown RBP9.34□□□□□ -0.91
SF3B3-202ENST00000562722 LHFPL5Q8TAF8 219 aa9.34□□□□□ -0.91
SF3B3-202ENST00000562722 ABHD1Q96SE0 405 aa9.34□□□□□ -0.91
SF3B3-202ENST00000562722 PBDC1Q9BVG4 233 aa9.34□□□□□ -0.91
SF3B3-202ENST00000562722 PRSS29PA6NIE9 313 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 DISC1C4P0D8 188 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 H3BMM0 161 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 TOMM40O96008 361 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 IFNA10P01566 189 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 CD74P04233 296 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 ZNF182P17025 639 aaPredicted RBP9.33□□□□□ -0.92
SF3B3-202ENST00000562722 FXYD7P58549 80 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 AARDQ4LEZ3 155 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 NOXA1Q86UR1 476 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 GLYATL2Q8WU03 294 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 GPR146Q96CH1 333 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 LINC00052Q96N35 136 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 SCRT1Q9BWW7 348 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 PFDN2Q9UHV9 154 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 DNAH2Q9P225 4427 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 FAT2Q9NYQ8 4349 aa9.33□□□□□ -0.92
SF3B3-202ENST00000562722 RGS5O15539 181 aa9.32□□□□□ -0.92
SF3B3-202ENST00000562722 BUB3O43684 328 aa9.32□□□□□ -0.92
SF3B3-202ENST00000562722 IFNA21P01568 189 aa9.32□□□□□ -0.92
SF3B3-202ENST00000562722 SPART-AS1P0CW21 52 aa9.32□□□□□ -0.92
SF3B3-202ENST00000562722 HLA-DRB4P13762 266 aa9.32□□□□□ -0.92
SF3B3-202ENST00000562722 NUP62P37198 522 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-202ENST00000562722 GPR107Q5VW38 600 aa9.32□□□□□ -0.92
SF3B3-202ENST00000562722 OR51G1Q8NGK1 321 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms