RNA–Protein interactions for RNA: ENST00000561375.5

DCAF11-238, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-238	ENST00000561375	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	IGLC1	P0CG04	106 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	SPP1	P10451	314 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	HLA-DMB	P28068	263 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	HTR2B	P41595	481 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	MEF2D	Q14814	521 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	PSMG4	Q5JS54	123 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	PRSS54	Q6PEW0	395 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	MORN3	Q6PF18	240 aa	Predicted RBP	13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375		Q6ZTC4	211 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	GLYATL2	Q8WU03	294 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	MIXL1	Q9H2W2	232 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	NAA60	Q9H7X0	242 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375		X6R8D5	127 aa		13.08	□□□□□ -0.32
DCAF11-238	ENST00000561375	TRAV30	A0A087WSZ9	112 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	CCDC160	A6NGH7	325 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	CEBPZOS	A8MTT3	80 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	CTDSP2	O14595	271 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	CDS2	O95674	445 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	MIF	P14174	115 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	OR10J1	P30954	320 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	FAM219A	Q8IW50	185 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	SELENOH	Q8IZQ5	122 aa	Known RBP	13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	OR1S2	Q8NGQ3	325 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	GLMP	Q8WWB7	406 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	RBPMS	Q93062	196 aa	Known RBP	13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	HRH4	Q9H3N8	390 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375		U3KQE9	123 aa		13.07	□□□□□ -0.32
DCAF11-238	ENST00000561375	DNAH10	Q8IVF4	4471 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	HELT	A6NFD8	242 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	C11orf94	C9JXX5	98 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	RGS5	O15539	181 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	B3GALNT1	O75752	331 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	EIF2B2	P49770	351 aa	Known RBP	13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	DHODH	Q02127	395 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	USF2	Q15853	346 aa	Predicted RBP	13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	AARD	Q4LEZ3	155 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	C2orf83	Q53S99	150 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	TMEM41B	Q5BJD5	291 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	TMEM268	Q5VZI3	342 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	C16orf54	Q6UWD8	224 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	SLC24A4	Q8NFF2	622 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	OR52E5	Q8NH55	327 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375		Q8WTZ3	238 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	TMEM170A	Q8WVE7	144 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	GPR146	Q96CH1	333 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	RAB40C	Q96S21	281 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	PRR13	Q9NZ81	148 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	CCDC59	Q9P031	241 aa	Known RBP	13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	TBC1D24	Q9ULP9	559 aa		13.06	□□□□□ -0.32
DCAF11-238	ENST00000561375	GABARAP	H6UMI1	98 aa		13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	IL4	P05112	153 aa		13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	SLC25A4	P12235	298 aa		13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	TCTA	P57738	103 aa		13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	ZNF767P	Q75MW2	155 aa		13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	C15orf40	Q8WUR7	153 aa		13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	ACY3	Q96HD9	319 aa		13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	RBM38	Q9H0Z9	239 aa	Known RBP	13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	CELA1	Q9UNI1	258 aa		13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	VPS13D	Q5THJ4	4388 aa		13.05	□□□□□ -0.32
DCAF11-238	ENST00000561375	TRAV10	A0A0B4J240	114 aa		13.04	□□□□□ -0.32
DCAF11-238	ENST00000561375	YPEL3	P61236	119 aa	Predicted RBP	13.04	□□□□□ -0.32
DCAF11-238	ENST00000561375	CSNK1G2-AS1	Q8NCQ2	148 aa		13.04	□□□□□ -0.32
DCAF11-238	ENST00000561375	OR4C16	Q8NGL9	310 aa		13.04	□□□□□ -0.32
DCAF11-238	ENST00000561375	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.04	□□□□□ -0.32
DCAF11-238	ENST00000561375	NPIPB3	Q92617	1050 aa		13.04	□□□□□ -0.32
DCAF11-238	ENST00000561375	SLIRP	Q9GZT3	109 aa	Known RBP	13.04	□□□□□ -0.32
DCAF11-238	ENST00000561375	IGHV4-4	A0A075B6R2	117 aa		13.03	□□□□□ -0.32
DCAF11-238	ENST00000561375	CRYM-AS1	A6NIL9	109 aa		13.03	□□□□□ -0.32
DCAF11-238	ENST00000561375	DISC1	C4P0D8	188 aa		13.03	□□□□□ -0.32
DCAF11-238	ENST00000561375	FAM90A26	D6RGX4	464 aa		13.03	□□□□□ -0.32
DCAF11-238	ENST00000561375	NPY1R	P25929	384 aa		13.03	□□□□□ -0.32
DCAF11-238	ENST00000561375	CENPS	Q8N2Z9	138 aa		13.03	□□□□□ -0.32
DCAF11-238	ENST00000561375	SSBP1	Q04837	148 aa	Known RBP	13.02	□□□□□ -0.33
DCAF11-238	ENST00000561375	SMIM4	Q8WVI0	70 aa		13.02	□□□□□ -0.33
DCAF11-238	ENST00000561375	XCL2	Q9UBD3	114 aa		13.02	□□□□□ -0.33
DCAF11-238	ENST00000561375	RSL24D1	Q9UHA3	163 aa	Known RBP	13.02	□□□□□ -0.33
DCAF11-238	ENST00000561375	GPR132	Q9UNW8	380 aa		13.02	□□□□□ -0.33
DCAF11-238	ENST00000561375	AKAIN1	P0CW23	69 aa		13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	SULT1A3	P0DMM9	295 aa		13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	SULT1A4	P0DMN0	295 aa		13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	AP2S1	P53680	142 aa	Predicted RBP	13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	SNRPD3	P62318	126 aa	Known RBP	13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	SURF2	Q15527	256 aa	Predicted RBP	13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	ETFRF1	Q6IPR1	90 aa		13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	SIGLEC15	Q6ZMC9	328 aa		13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	OR51S1	Q8NGJ8	323 aa		13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	MCFD2	Q8NI22	146 aa		13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	NRN1	Q9NPD7	142 aa		13.01	□□□□□ -0.33
DCAF11-238	ENST00000561375	TOMM40	O96008	361 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	IFNA10	P01566	189 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	RD3L	P0DJH9	198 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	DEFB1	P60022	68 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	MRPS10	P82664	201 aa	Known RBP	13	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms