RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 E5RGE8 158 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 K7EPK0 472 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 TAAR5O14804 337 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 RTL8CO15255 209 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 CDS2O95674 445 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 SCGB1D2O95969 90 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 IGHV3-23P01764 117 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 MBPP02686 304 aaPredicted RBP7.29□□□□□ -1.24
TPM1-225ENST00000560679 RPL12P30050 165 aaKnown RBP7.29□□□□□ -1.24
TPM1-225ENST00000560679 EIF5AP63241 154 aaKnown RBP7.29□□□□□ -1.24
TPM1-225ENST00000560679 TMEM177Q53S58 311 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 UNQ9165/PRO28630Q6UXU0 137 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 FAM219AQ8IW50 185 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 BAP18Q8IXM2 172 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 SELENOHQ8IZQ5 122 aaKnown RBP7.29□□□□□ -1.24
TPM1-225ENST00000560679 SLC35G3Q8N808 338 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 OR4D5Q8NGN0 318 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 RBPMSQ93062 196 aaKnown RBP7.29□□□□□ -1.24
TPM1-225ENST00000560679 SDHAF2Q9NX18 166 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 FBXL17Q9UF56 701 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 NSG2Q9Y328 171 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 S4R3C0 116 aa7.29□□□□□ -1.24
TPM1-225ENST00000560679 SHOXO15266 292 aa7.28□□□□□ -1.24
TPM1-225ENST00000560679 PGLYRP1O75594 196 aaPredicted RBP7.28□□□□□ -1.24
TPM1-225ENST00000560679 C8orf88P0DMB2 117 aa7.28□□□□□ -1.24
TPM1-225ENST00000560679 RPL35AP18077 110 aaKnown RBP7.28□□□□□ -1.24
TPM1-225ENST00000560679 ARL3P36405 182 aa7.28□□□□□ -1.24
TPM1-225ENST00000560679 UBE2KP61086 200 aa7.28□□□□□ -1.24
TPM1-225ENST00000560679 FAM74A1Q5RGS3 127 aa7.28□□□□□ -1.24
TPM1-225ENST00000560679 THOC7Q6I9Y2 204 aaKnown RBP7.28□□□□□ -1.24
TPM1-225ENST00000560679 HSD17B13Q7Z5P4 300 aaPredicted RBP7.28□□□□□ -1.24
TPM1-225ENST00000560679 TTC9CQ8N5M4 171 aa7.28□□□□□ -1.24
TPM1-225ENST00000560679 STPG3Q8N7X2 389 aa7.28□□□□□ -1.24
TPM1-225ENST00000560679 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.28□□□□□ -1.24
TPM1-225ENST00000560679 LRRC20Q8TCA0 184 aa7.28□□□□□ -1.24
TPM1-225ENST00000560679 C2CD4CQ8TF44 421 aa7.28□□□□□ -1.24
TPM1-225ENST00000560679 C11orf68Q9H3H3 251 aaKnown RBP7.28□□□□□ -1.24
TPM1-225ENST00000560679 ZNF430Q9H8G1 570 aaPredicted RBP7.28□□□□□ -1.24
TPM1-225ENST00000560679 TRAV25A0A0B4J276 109 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 PRSS29PA6NIE9 313 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 TEX22C9J3V5 150 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 ST8SIA3O43173 380 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 F2RP25116 425 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 P2RY1P47900 373 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 TCTAP57738 103 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 MSMO1Q15800 293 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 NMSQ5H8A3 153 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 FAM209BQ5JX69 171 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 CLEC19AQ6UXS0 136 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 ZNF575Q86XF7 245 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 CCDC28AQ8IWP9 274 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 EIF4E3Q8N5X7 224 aaKnown RBP7.27□□□□□ -1.25
TPM1-225ENST00000560679 OR2C3Q8N628 320 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 TEX45Q8NA69 505 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 C11orf45Q8TAV5 145 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 FANCD2OSQ96PS1 177 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 OR2D2Q9H210 308 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 FBXL7Q9UJT9 491 aa7.27□□□□□ -1.25
TPM1-225ENST00000560679 RCL1Q9Y2P8 373 aaKnown RBP7.27□□□□□ -1.25
TPM1-225ENST00000560679 A0A1B0GW64 132 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 ZNF320A2RRD8 509 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 TNFSF12O43508 249 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 IFNA4P05014 189 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 SERPINE2P07093 398 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 FGF2P09038 288 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 SAA1P0DJI8 122 aaPredicted RBP7.26□□□□□ -1.25
TPM1-225ENST00000560679 SLC25A6P12236 298 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 NKX2-1P43699 371 aaPredicted RBP7.26□□□□□ -1.25
TPM1-225ENST00000560679 TAGLNQ01995 201 aaKnown RBP7.26□□□□□ -1.25
TPM1-225ENST00000560679 RTL8BQ17RB0 113 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 VMA21Q3ZAQ7 101 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 RPL7L1Q6DKI1 246 aaKnown RBP7.26□□□□□ -1.25
TPM1-225ENST00000560679 EIF5AL1Q6IS14 154 aaKnown RBP7.26□□□□□ -1.25
TPM1-225ENST00000560679 ZBTB34Q8NCN2 500 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 DMBX1Q8NFW5 382 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 SPAG8Q99932 426 aaPredicted RBP7.26□□□□□ -1.25
TPM1-225ENST00000560679 C11orf1Q9H5F2 150 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 MAP6D1Q9H9H5 199 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 PLA2G2EQ9NZK7 142 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 ZNF257Q9Y2Q1 563 aa7.26□□□□□ -1.25
TPM1-225ENST00000560679 RBM7Q9Y580 266 aaKnown RBP7.26□□□□□ -1.25
TPM1-225ENST00000560679 LINC00473A8K010 186 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 IGLL5B9A064 214 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 E7EUB6 86 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 DEFB4AO15263 64 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 CRYZL1O95825 349 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 PVALBP20472 110 aaPredicted RBP7.25□□□□□ -1.25
TPM1-225ENST00000560679 MFAP2P55001 183 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 ZNF124Q15973 351 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 FAM106AQ4KMX7 169 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 ZNF585BQ52M93 769 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 OR4A47Q6IF82 309 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 RBPMS2Q6ZRY4 209 aaKnown RBP7.25□□□□□ -1.25
TPM1-225ENST00000560679 OR51H1Q8NH63 302 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 RNF141Q8WVD5 230 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 TMED6Q8WW62 240 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 LSM10Q969L4 123 aaKnown RBP7.25□□□□□ -1.25
TPM1-225ENST00000560679 MARC2Q969Z3 335 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 GPHA2Q96T91 129 aa7.25□□□□□ -1.25
TPM1-225ENST00000560679 BORCS7-ASMTA0A0B4J1R7 106 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms