RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 TIGITQ495A1 244 aa9.25□□□□□ -0.93
SNX1-209ENST00000559961 C2orf83Q53S99 150 aa9.25□□□□□ -0.93
SNX1-209ENST00000559961 PVRIGQ6DKI7 326 aa9.25□□□□□ -0.93
SNX1-209ENST00000559961 SELENOHQ8IZQ5 122 aaKnown RBP9.25□□□□□ -0.93
SNX1-209ENST00000559961 SLC24A4Q8NFF2 622 aa9.25□□□□□ -0.93
SNX1-209ENST00000559961 GLYATL2Q8WU03 294 aa9.25□□□□□ -0.93
SNX1-209ENST00000559961 ZNF414Q96IQ9 312 aa9.25□□□□□ -0.93
SNX1-209ENST00000559961 RTBDNQ9BSG5 229 aaPredicted RBP9.25□□□□□ -0.93
SNX1-209ENST00000559961 C11orf68Q9H3H3 251 aaKnown RBP9.25□□□□□ -0.93
SNX1-209ENST00000559961 ZFAND3Q9H8U3 227 aa9.25□□□□□ -0.93
SNX1-209ENST00000559961 CRYM-AS1A6NIL9 109 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 FABP1P07148 127 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 RD3LP0DJH9 198 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 YPEL3P61236 119 aaPredicted RBP9.24□□□□□ -0.93
SNX1-209ENST00000559961 MLANAQ16655 118 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 FAAP20Q6NZ36 180 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 OR51S1Q8NGJ8 323 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 C2CD4CQ8TF44 421 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 IL22RA2Q969J5 263 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 GPR146Q96CH1 333 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 ACY3Q96HD9 319 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 BCL7BQ9BQE9 202 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 GPR132Q9UNW8 380 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 U3KQ87 197 aa9.24□□□□□ -0.93
SNX1-209ENST00000559961 SACSQ9NZJ4 4579 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 STARD9Q9P2P6 4700 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 FABP12A6NFH5 140 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 SMIM18P0DKX4 95 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 AKR1C4P17516 323 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 NPY1RP25929 384 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 CCR6P51684 374 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 TMBIM6P55061 237 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 ATP5IP56385 69 aaPredicted RBP9.23□□□□□ -0.93
SNX1-209ENST00000559961 TCTAP57738 103 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 AP3S2P59780 193 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 Q6ZRM9 215 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 LILRB2Q8N423 598 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 OR4C16Q8NGL9 310 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 C1QTNF4Q9BXJ3 329 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 MIXL1Q9H2W2 232 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 FNDC4Q9H6D8 234 aaPredicted RBP9.23□□□□□ -0.93
SNX1-209ENST00000559961 CCDC59Q9P031 241 aaKnown RBP9.23□□□□□ -0.93
SNX1-209ENST00000559961 TMEM56-RWDD3S4R434 201 aa9.23□□□□□ -0.93
SNX1-209ENST00000559961 A0A0G2JRQ6 117 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 C11orf94C9JXX5 98 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 K7EQG2 157 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 IL4P05112 153 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 ZNF688P0C7X2 276 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 NANOS2P60321 138 aaKnown RBP9.22□□□□□ -0.93
SNX1-209ENST00000559961 EWSR1Q01844 656 aaKnown RBP eCLIP9.22□□□□□ -0.93
SNX1-209ENST00000559961 SPCS2Q15005 226 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 BSXQ3C1V8 233 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 AARDQ4LEZ3 155 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 ACTL10Q5JWF8 245 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 PRSS54Q6PEW0 395 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 LGI3Q8N145 548 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 OR1S1Q8NH92 325 aa9.22□□□□□ -0.93
SNX1-209ENST00000559961 ANKRD20A5PA0PJZ0 165 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 NXPH3O95157 252 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 IGKV1-17P01599 117 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 IGLC1P0CG04 106 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 MIFP14174 115 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 ID1P41134 155 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 ALDH3B2P48448 385 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 RAB11AP62491 216 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 RPP30P78346 268 aaKnown RBP9.21□□□□□ -0.94
SNX1-209ENST00000559961 KLF9Q13886 244 aaPredicted RBP9.21□□□□□ -0.94
SNX1-209ENST00000559961 SMCO1Q147U7 214 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 PSMG4Q5JS54 123 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 LGALS9CQ6DKI2 356 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 DTD1Q8TEA8 209 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 NPIPB3Q92617 1050 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 PPP1R14BQ96C90 147 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 SLC35E1Q96K37 410 aa9.21□□□□□ -0.94
SNX1-209ENST00000559961 A0A0B4J2A0 478 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 ZFP92A6NM28 416 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 KNCNA6PVL3 124 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 DEFB4AO15263 64 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 TOMM40O96008 361 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 S100A7P31151 101 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 C16orf54Q6UWD8 224 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 SIGLEC15Q6ZMC9 328 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 TRPT1Q86TN4 253 aaKnown RBP9.2□□□□□ -0.94
SNX1-209ENST00000559961 OR51G1Q8NGK1 321 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 LHFPL5Q8TAF8 219 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 PBDC1Q9BVG4 233 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 SEPSECSQ9HD40 501 aaKnown RBP9.2□□□□□ -0.94
SNX1-209ENST00000559961 MRPL36Q9P0J6 103 aaKnown RBP9.2□□□□□ -0.94
SNX1-209ENST00000559961 SHPKQ9UHJ6 478 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 TBC1D24Q9ULP9 559 aa9.2□□□□□ -0.94
SNX1-209ENST00000559961 PAIP2BQ9ULR5 123 aaKnown RBP9.2□□□□□ -0.94
SNX1-209ENST00000559961 IGLL5B9A064 214 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 MED6O75586 246 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 S100A5P33763 92 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 GPX4P36969 197 aaPredicted RBP9.19□□□□□ -0.94
SNX1-209ENST00000559961 PYDC2Q56P42 97 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 NMSQ5H8A3 153 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 FAM24BQ8N5W8 94 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 MCFD2Q8NI22 146 aa9.19□□□□□ -0.94
SNX1-209ENST00000559961 DYNC2LI1Q8TCX1 351 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms