RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 TMEM229BQ8NBD8 167 aa17.3■□□□□ 0.36
PBX1-217ENST00000559578 Q8WTZ3 238 aa17.3■□□□□ 0.36
PBX1-217ENST00000559578 CD74P04233 296 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 HTR2BP41595 481 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 PSMG4Q5JS54 123 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 STEAP1BQ6NZ63 245 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 FAM219AQ8IW50 185 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 CSNK1G2-AS1Q8NCQ2 148 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 OR1S2Q8NGQ3 325 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 OR52E5Q8NH55 327 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 RAB40CQ96S21 281 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 RNF126Q9BV68 326 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 U3KQE9 123 aa17.29■□□□□ 0.36
PBX1-217ENST00000559578 GABARAPO95166 117 aa17.28■□□□□ 0.36
PBX1-217ENST00000559578 HNRNPCP07910 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
PBX1-217ENST00000559578 NUTF2P61970 127 aaKnown RBP17.28■□□□□ 0.36
PBX1-217ENST00000559578 Q6ZRM9 215 aa17.28■□□□□ 0.36
PBX1-217ENST00000559578 LINC00336Q6ZUF6 198 aa17.28■□□□□ 0.36
PBX1-217ENST00000559578 C15orf40Q8WUR7 153 aa17.28■□□□□ 0.36
PBX1-217ENST00000559578 HEYLQ9NQ87 328 aaPredicted RBP17.28■□□□□ 0.36
PBX1-217ENST00000559578 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.28■□□□□ 0.36
PBX1-217ENST00000559578 OR5AC1P0C628 307 aa17.27■□□□□ 0.36
PBX1-217ENST00000559578 IGLC1P0CG04 106 aa17.27■□□□□ 0.36
PBX1-217ENST00000559578 SLC25A4P12235 298 aa17.27■□□□□ 0.36
PBX1-217ENST00000559578 AARDQ4LEZ3 155 aa17.27■□□□□ 0.36
PBX1-217ENST00000559578 GPR107Q5VW38 600 aa17.27■□□□□ 0.36
PBX1-217ENST00000559578 FAAP20Q6NZ36 180 aa17.27■□□□□ 0.36
PBX1-217ENST00000559578 C16orf54Q6UWD8 224 aa17.27■□□□□ 0.36
PBX1-217ENST00000559578 GLMPQ8WWB7 406 aa17.27■□□□□ 0.36
PBX1-217ENST00000559578 C1QTNF4Q9BXJ3 329 aa17.27■□□□□ 0.36
PBX1-217ENST00000559578 C14orf166Q9Y224 244 aaKnown RBP17.27■□□□□ 0.36
PBX1-217ENST00000559578 TEX13DA0A0J9YY54 714 aaPredicted RBP17.26■□□□□ 0.35
PBX1-217ENST00000559578 OR10J1P30954 320 aa17.26■□□□□ 0.35
PBX1-217ENST00000559578 RND2P52198 227 aa17.26■□□□□ 0.35
PBX1-217ENST00000559578 YPEL3P61236 119 aaPredicted RBP17.26■□□□□ 0.35
PBX1-217ENST00000559578 SNRPD3P62318 126 aaKnown RBP17.26■□□□□ 0.35
PBX1-217ENST00000559578 PRSS54Q6PEW0 395 aa17.26■□□□□ 0.35
PBX1-217ENST00000559578 TMEM222Q9H0R3 208 aa17.26■□□□□ 0.35
PBX1-217ENST00000559578 GABARAPH6UMI1 98 aa17.25■□□□□ 0.35
PBX1-217ENST00000559578 RGS5O15539 181 aa17.25■□□□□ 0.35
PBX1-217ENST00000559578 CDS2O95674 445 aa17.25■□□□□ 0.35
PBX1-217ENST00000559578 DHODHQ02127 395 aa17.25■□□□□ 0.35
PBX1-217ENST00000559578 C2orf83Q53S99 150 aa17.25■□□□□ 0.35
PBX1-217ENST00000559578 LHFPL5Q8TAF8 219 aa17.25■□□□□ 0.35
PBX1-217ENST00000559578 RNASEH2CQ8TDP1 164 aaKnown RBP17.25■□□□□ 0.35
PBX1-217ENST00000559578 MIXL1Q9H2W2 232 aa17.25■□□□□ 0.35
PBX1-217ENST00000559578 CELA1Q9UNI1 258 aa17.25■□□□□ 0.35
PBX1-217ENST00000559578 DEFB131BA0A096LNP1 70 aa17.24■□□□□ 0.35
PBX1-217ENST00000559578 AMBPP02760 352 aa17.24■□□□□ 0.35
PBX1-217ENST00000559578 SMIM18P0DKX4 95 aa17.24■□□□□ 0.35
PBX1-217ENST00000559578 C12orf74Q32Q52 190 aa17.24■□□□□ 0.35
PBX1-217ENST00000559578 ETFRF1Q6IPR1 90 aa17.24■□□□□ 0.35
PBX1-217ENST00000559578 SLC24A4Q8NFF2 622 aa17.24■□□□□ 0.35
PBX1-217ENST00000559578 GLYATL2Q8WU03 294 aa17.24■□□□□ 0.35
PBX1-217ENST00000559578 RBPMSQ93062 196 aaKnown RBP17.24■□□□□ 0.35
PBX1-217ENST00000559578 RTBDNQ9BSG5 229 aaPredicted RBP17.24■□□□□ 0.35
PBX1-217ENST00000559578 SEPSECSQ9HD40 501 aaKnown RBP17.24■□□□□ 0.35
PBX1-217ENST00000559578 FAM90A26D6RGX4 464 aa17.23■□□□□ 0.35
PBX1-217ENST00000559578 IL4P05112 153 aa17.23■□□□□ 0.35
PBX1-217ENST00000559578 MEF2DQ14814 521 aa17.23■□□□□ 0.35
PBX1-217ENST00000559578 SELENOHQ8IZQ5 122 aaKnown RBP17.23■□□□□ 0.35
PBX1-217ENST00000559578 NAA60Q9H7X0 242 aa17.23■□□□□ 0.35
PBX1-217ENST00000559578 NRN1Q9NPD7 142 aa17.23■□□□□ 0.35
PBX1-217ENST00000559578 CACNG5Q9UF02 275 aa17.23■□□□□ 0.35
PBX1-217ENST00000559578 CEBPZOSA8MTT3 80 aa17.22■□□□□ 0.35
PBX1-217ENST00000559578 DISC1C4P0D8 188 aa17.22■□□□□ 0.35
PBX1-217ENST00000559578 GSTZ1O43708 216 aaPredicted RBP17.22■□□□□ 0.35
PBX1-217ENST00000559578 NPY1RP25929 384 aa17.22■□□□□ 0.35
PBX1-217ENST00000559578 SSBP1Q04837 148 aaKnown RBP17.22■□□□□ 0.35
PBX1-217ENST00000559578 USF2Q15853 346 aaPredicted RBP17.22■□□□□ 0.35
PBX1-217ENST00000559578 ZNF767PQ75MW2 155 aa17.22■□□□□ 0.35
PBX1-217ENST00000559578 GPR146Q96CH1 333 aa17.22■□□□□ 0.35
PBX1-217ENST00000559578 XCL2Q9UBD3 114 aa17.22■□□□□ 0.35
PBX1-217ENST00000559578 CTDSP2O14595 271 aa17.21■□□□□ 0.35
PBX1-217ENST00000559578 NXPH3O95157 252 aa17.21■□□□□ 0.35
PBX1-217ENST00000559578 P0DMU3 169 aa17.21■□□□□ 0.35
PBX1-217ENST00000559578 FAM231AP0DMU4 169 aa17.21■□□□□ 0.35
PBX1-217ENST00000559578 FAM231CP0DMU5 169 aa17.21■□□□□ 0.35
PBX1-217ENST00000559578 SIGLEC15Q6ZMC9 328 aa17.21■□□□□ 0.35
PBX1-217ENST00000559578 POM121L12Q8N7R1 296 aa17.21■□□□□ 0.35
PBX1-217ENST00000559578 NDUFAF3Q9BU61 184 aa17.21■□□□□ 0.35
PBX1-217ENST00000559578 H3BMM0 161 aa17.2■□□□□ 0.34
PBX1-217ENST00000559578 BUB3O43684 328 aa17.2■□□□□ 0.34
PBX1-217ENST00000559578 RD3LP0DJH9 198 aa17.2■□□□□ 0.34
PBX1-217ENST00000559578 MRPS10P82664 201 aaKnown RBP17.2■□□□□ 0.34
PBX1-217ENST00000559578 TMEM268Q5VZI3 342 aa17.2■□□□□ 0.34
PBX1-217ENST00000559578 NOXA1Q86UR1 476 aa17.2■□□□□ 0.34
PBX1-217ENST00000559578 NPIPB3Q92617 1050 aa17.2■□□□□ 0.34
PBX1-217ENST00000559578 CACFD1Q9UGQ2 172 aa17.2■□□□□ 0.34
PBX1-217ENST00000559578 TOMM40O96008 361 aa17.19■□□□□ 0.34
PBX1-217ENST00000559578 AKAIN1P0CW23 69 aa17.19■□□□□ 0.34
PBX1-217ENST00000559578 SURF2Q15527 256 aaPredicted RBP17.19■□□□□ 0.34
PBX1-217ENST00000559578 OR4C16Q8NGL9 310 aa17.19■□□□□ 0.34
PBX1-217ENST00000559578 SMIM4Q8WVI0 70 aa17.19■□□□□ 0.34
PBX1-217ENST00000559578 ACY3Q96HD9 319 aa17.19■□□□□ 0.34
PBX1-217ENST00000559578 GPR132Q9UNW8 380 aa17.19■□□□□ 0.34
PBX1-217ENST00000559578 CRYM-AS1A6NIL9 109 aa17.18■□□□□ 0.34
PBX1-217ENST00000559578 IL18Q14116 193 aa17.18■□□□□ 0.34
PBX1-217ENST00000559578 HLA-DRB4P13762 266 aa17.17■□□□□ 0.34
PBX1-217ENST00000559578 SPCS2Q15005 226 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms