RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TFPI2P48307 235 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 RND2P52198 227 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 APOC4P55056 127 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 RPL11P62913 178 aaKnown RBP9.37□□□□□ -0.91
LRRC28-214ENST00000559433 PPP1R1AQ13522 171 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 RBMS2Q15434 407 aaKnown RBP9.37□□□□□ -0.91
LRRC28-214ENST00000559433 BAK1Q16611 211 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 PRSS54Q6PEW0 395 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 NOXA1Q86UR1 476 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 CENPSQ8N2Z9 138 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 TMEM170AQ8WVE7 144 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 ST8SIA2Q92186 375 aa9.37□□□□□ -0.91
LRRC28-214ENST00000559433 NARS2Q96I59 477 aaKnown RBP9.37□□□□□ -0.91
LRRC28-214ENST00000559433 IGHV3-66A0A0C4DH42 116 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 LINC00854A0A1B0GVQ3 168 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 NAP1L6A6NFF2 107 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 DNASE2O00115 360 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-214ENST00000559433 IGKV1-17P01599 117 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 APOHP02749 345 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-214ENST00000559433 SLC25A4P12235 298 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 OR10J1P30954 320 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 ETFRF1Q6IPR1 90 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 TCF24Q7RTU0 167 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 GBGT1Q8N5D6 347 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 LRTM2Q8N967 370 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 OR1S2Q8NGQ3 325 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 METTL26Q96S19 204 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 TMEM231Q9H6L2 316 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 NDUFA13Q9P0J0 144 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 U3KQ87 197 aa9.36□□□□□ -0.91
LRRC28-214ENST00000559433 NDUFB6O95139 128 aa9.35□□□□□ -0.91
LRRC28-214ENST00000559433 IGLC1P0CG04 106 aa9.35□□□□□ -0.91
LRRC28-214ENST00000559433 NPPCP23582 126 aa9.35□□□□□ -0.91
LRRC28-214ENST00000559433 FAM90A2PQ658T7 463 aa9.35□□□□□ -0.91
LRRC28-214ENST00000559433 STPG3Q8N7X2 389 aa9.35□□□□□ -0.91
LRRC28-214ENST00000559433 ACY3Q96HD9 319 aa9.35□□□□□ -0.91
LRRC28-214ENST00000559433 SDHCQ99643 169 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-214ENST00000559433 A0A1W2PS18 150 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 CENPXA8MT69 81 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 UBE2CO00762 179 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 PITX3O75364 302 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 DFFBO76075 338 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 IFNA4P05014 189 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 SLC25A6P12236 298 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 UBE2MP61081 183 aaKnown RBP9.34□□□□□ -0.91
LRRC28-214ENST00000559433 WFDC3Q8IUB2 231 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 APRG1Q8IVJ8 170 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 LILRB2Q8N423 598 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 NPIPB3Q92617 1050 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 TMED3Q9Y3Q3 217 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 RYR3Q15413 4870 aa9.34□□□□□ -0.91
LRRC28-214ENST00000559433 HOXB5P09067 269 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 IAPPP10997 89 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 IL7P13232 177 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 RPL35AP18077 110 aaKnown RBP9.33□□□□□ -0.92
LRRC28-214ENST00000559433 CRYBB3P26998 211 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 YPEL3P61236 119 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-214ENST00000559433 Q8WTZ3 238 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 GRAMD2BQ96HH9 432 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 MS4A6AQ9H2W1 248 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 MAP6D1Q9H9H5 199 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 FLVCR2Q9UPI3 526 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 STARD9Q9P2P6 4700 aa9.33□□□□□ -0.92
LRRC28-214ENST00000559433 C9orf170A2RU37 121 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 FAM90A26D6RGX4 464 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 SPRY2O43597 315 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 MED6O75586 246 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 BTCP35070 178 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 P2RY1P47900 373 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 EIF2B2P49770 351 aaKnown RBP9.32□□□□□ -0.92
LRRC28-214ENST00000559433 ATP5IP56385 69 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-214ENST00000559433 ZNF124Q15973 351 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 GGNBP1Q5YKI7 109 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 Q6ZWC4 215 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 STXBP6Q8NFX7 210 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 SLC35E1Q96K37 410 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 C7orf50Q9BRJ6 194 aaKnown RBP9.32□□□□□ -0.92
LRRC28-214ENST00000559433 OVOL2Q9BRP0 275 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 MAGT1Q9H0U3 335 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 RABAC1Q9UI14 185 aa9.32□□□□□ -0.92
LRRC28-214ENST00000559433 PAIP2BQ9ULR5 123 aaKnown RBP9.32□□□□□ -0.92
LRRC28-214ENST00000559433 CSMD3Q7Z407 3707 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 TRAV2A0A0B4J234 112 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 KIR2DL5BA0A0G2JN68 375 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 KIR2DL5BA0A0G2JPC4 375 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 TOMM40O96008 361 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 IL4P05112 153 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 HNRNPCP07910 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
LRRC28-214ENST00000559433 RD3LP0DJH9 198 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 ANXA7P20073 488 aaKnown RBP9.31□□□□□ -0.92
LRRC28-214ENST00000559433 RAB11AP62491 216 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 DHRS2Q13268 280 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 DEFB135Q30KP9 77 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 C4orf46Q504U0 113 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 KIR2DL5AQ8N109 375 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 KIR2DL5BQ8NHK3 375 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 COQ8AQ8NI60 647 aa9.31□□□□□ -0.92
LRRC28-214ENST00000559433 CIB3Q96Q77 187 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms