RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ZNF414Q96IQ9 312 aa5.95□□□□□ -1.46
TRAF3-205ENST00000558700 NAA50Q9GZZ1 169 aaKnown RBP5.95□□□□□ -1.46
TRAF3-205ENST00000558700 C14orf166Q9Y224 244 aaKnown RBP5.95□□□□□ -1.46
TRAF3-205ENST00000558700 PUS1Q9Y606 427 aaKnown RBP eCLIP5.95□□□□□ -1.46
TRAF3-205ENST00000558700 TRGV11A0A075B6L2 103 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 IGHV3OR16-13A0A075B7E8 117 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 IGHV3-74A0A0B4J1X5 117 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 TRAV2A0A0B4J234 112 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 A0A0B4J293 547 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 RPS10-NUDT3A0A1W2PQS6 291 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 A0A1W2PS18 150 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 MPTX1A8MV57 137 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 DNASE2O00115 360 aaPredicted RBP5.94□□□□□ -1.46
TRAF3-205ENST00000558700 RGS5O15539 181 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 DFFBO76075 338 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 RNASE2P10153 161 aaKnown RBP5.94□□□□□ -1.46
TRAF3-205ENST00000558700 SURF2Q15527 256 aaPredicted RBP5.94□□□□□ -1.46
TRAF3-205ENST00000558700 TOMM20LQ6UXN7 152 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 GPR141Q7Z602 305 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 APRG1Q8IVJ8 170 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 OR4D10Q8NGI6 311 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 TERB2Q8NHR7 220 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 MARCH1Q8TCQ1 289 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 SMIM4Q8WVI0 70 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 ABHD1Q96SE0 405 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 MRPS26Q9BYN8 205 aaKnown RBP5.94□□□□□ -1.46
TRAF3-205ENST00000558700 TMEM222Q9H0R3 208 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 C11orf68Q9H3H3 251 aaKnown RBP5.94□□□□□ -1.46
TRAF3-205ENST00000558700 VSIRQ9H7M9 311 aa5.94□□□□□ -1.46
TRAF3-205ENST00000558700 KLK5Q9Y337 293 aaPredicted RBP5.94□□□□□ -1.46
TRAF3-205ENST00000558700 ALMS1Q8TCU4 4167 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 A0A0G2JRQ6 117 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 TEX13DA0A0J9YY54 714 aaPredicted RBP5.93□□□□□ -1.46
TRAF3-205ENST00000558700 DISC1C4P0D8 188 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 CLN5O75503 358 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 OR5AC1P0C628 307 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 NPPCP23582 126 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 HTR2BP41595 481 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 RPL5P46777 297 aaKnown RBP5.93□□□□□ -1.46
TRAF3-205ENST00000558700 SPCS3P61009 180 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 SUMO2P61956 95 aaKnown RBP5.93□□□□□ -1.46
TRAF3-205ENST00000558700 EWSR1Q01844 656 aaKnown RBP eCLIP5.93□□□□□ -1.46
TRAF3-205ENST00000558700 BSXQ3C1V8 233 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 SP6Q3SY56 376 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 FAM90A2PQ658T7 463 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 PVRIGQ6DKI7 326 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 CEMP1Q6PRD7 247 aaPredicted RBP5.93□□□□□ -1.46
TRAF3-205ENST00000558700 GBGT1Q8N5D6 347 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 RBPMSQ93062 196 aaKnown RBP5.93□□□□□ -1.46
TRAF3-205ENST00000558700 METTL26Q96S19 204 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 CSTL1Q9H114 145 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 MIXL1Q9H2W2 232 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 RABL2AQ9UBK7 228 aaPredicted RBP5.93□□□□□ -1.46
TRAF3-205ENST00000558700 RABL2BQ9UNT1 228 aa5.93□□□□□ -1.46
TRAF3-205ENST00000558700 BIRC6Q9NR09 4857 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 TRAV30A0A087WSZ9 112 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 A0A1B0GU03 582 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 CEBPZOSA8MTT3 80 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 NOL3O60936 208 aaKnown RBP5.92□□□□□ -1.46
TRAF3-205ENST00000558700 TMEM50AO95807 157 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 LY6G6CO95867 125 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 CA1P00915 261 aaPredicted RBP5.92□□□□□ -1.46
TRAF3-205ENST00000558700 AKAIN1P0CW23 69 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 SLC25A4P12235 298 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 ETV6P41212 452 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 P2RY1P47900 373 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 EIF2B2P49770 351 aaKnown RBP5.92□□□□□ -1.46
TRAF3-205ENST00000558700 DEFB131AP59861 70 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 DHODHQ02127 395 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 IL18Q14116 193 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 ZNF124Q15973 351 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 AARDQ4LEZ3 155 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 FAAP20Q6NZ36 180 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 SLC24A4Q8NFF2 622 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 STXBP6Q8NFX7 210 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 OR4X1Q8NH49 305 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 OR52E5Q8NH55 327 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 RAB2BQ8WUD1 216 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 NPIPB3Q92617 1050 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 GRAMD2BQ96HH9 432 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 PRRT1Q99946 306 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 RARRES2Q99969 163 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 MFFQ9GZY8 342 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 MS4A6AQ9H2W1 248 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 FNDC4Q9H6D8 234 aaPredicted RBP5.92□□□□□ -1.46
TRAF3-205ENST00000558700 NAA60Q9H7X0 242 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.92□□□□□ -1.46
TRAF3-205ENST00000558700 CCDC59Q9P031 241 aaKnown RBP5.92□□□□□ -1.46
TRAF3-205ENST00000558700 CACNG5Q9UF02 275 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 CACFD1Q9UGQ2 172 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 RABAC1Q9UI14 185 aa5.92□□□□□ -1.46
TRAF3-205ENST00000558700 IGHV3-66A0A0C4DH42 116 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 GAGE12BA1L429 117 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 GAGE12HA6NDE8 117 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 GAGE10A6NGK3 116 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 CRYM-AS1A6NIL9 109 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 NPIPB6E9PJ23 425 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 CTDSPLO15194 276 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 CDS2O95674 445 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 APOHP02749 345 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms