RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 DUXBA0A1W2PPF3 345 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 A0A1W2PS18 150 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 UBE2CO00762 179 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 IFNA10P01566 189 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 IGLC1P0CG04 106 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 CRYBB3P26998 211 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 RND2P52198 227 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 Q6ZWC4 215 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 WFDC3Q8IUB2 231 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 KIR2DL5AQ8N109 375 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 LRTM2Q8N967 370 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 OR1S2Q8NGQ3 325 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 OR1S1Q8NH92 325 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 KIR2DL5BQ8NHK3 375 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 IL17DQ8TAD2 202 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 DTD1Q8TEA8 209 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 Q8WTZ3 238 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 METTL26Q96S19 204 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 MS4A6AQ9H2W1 248 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 TMEM231Q9H6L2 316 aa12.36□□□□□ -0.43
NEDD4-212ENST00000557845 DNASE2O00115 360 aaPredicted RBP12.35□□□□□ -0.43
NEDD4-212ENST00000557845 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
NEDD4-212ENST00000557845 VAMP1P23763 118 aa12.35□□□□□ -0.43
NEDD4-212ENST00000557845 OR10J1P30954 320 aa12.35□□□□□ -0.43
NEDD4-212ENST00000557845 YPEL3P61236 119 aaPredicted RBP12.35□□□□□ -0.43
NEDD4-212ENST00000557845 RPL11P62913 178 aaKnown RBP12.35□□□□□ -0.43
NEDD4-212ENST00000557845 ZNF124Q15973 351 aa12.35□□□□□ -0.43
NEDD4-212ENST00000557845 STPG3Q8N7X2 389 aa12.35□□□□□ -0.43
NEDD4-212ENST00000557845 NPIPB3Q92617 1050 aa12.35□□□□□ -0.43
NEDD4-212ENST00000557845 MAP6D1Q9H9H5 199 aa12.35□□□□□ -0.43
NEDD4-212ENST00000557845 TP53TG1Q9Y2A0 90 aa12.35□□□□□ -0.43
NEDD4-212ENST00000557845 CSMD3Q7Z407 3707 aa12.35□□□□□ -0.43
NEDD4-212ENST00000557845 SPRY2O43597 315 aa12.34□□□□□ -0.43
NEDD4-212ENST00000557845 PITX3O75364 302 aa12.34□□□□□ -0.43
NEDD4-212ENST00000557845 SFT2D2O95562 160 aa12.34□□□□□ -0.43
NEDD4-212ENST00000557845 BAK1Q16611 211 aa12.34□□□□□ -0.43
NEDD4-212ENST00000557845 TRAV2A0A0B4J234 112 aa12.33□□□□□ -0.44
NEDD4-212ENST00000557845 INPP1P49441 399 aa12.33□□□□□ -0.44
NEDD4-212ENST00000557845 ATP5IP56385 69 aaPredicted RBP12.33□□□□□ -0.44
NEDD4-212ENST00000557845 PPP1R1AQ13522 171 aa12.33□□□□□ -0.44
NEDD4-212ENST00000557845 RBMS2Q15434 407 aaKnown RBP12.33□□□□□ -0.44
NEDD4-212ENST00000557845 DEFB135Q30KP9 77 aa12.33□□□□□ -0.44
NEDD4-212ENST00000557845 CENPSQ8N2Z9 138 aa12.33□□□□□ -0.44
NEDD4-212ENST00000557845 U3KQE9 123 aa12.33□□□□□ -0.44
NEDD4-212ENST00000557845 IFNA4P05014 189 aa12.32□□□□□ -0.44
NEDD4-212ENST00000557845 SLC25A6P12236 298 aa12.32□□□□□ -0.44
NEDD4-212ENST00000557845 P2RY1P47900 373 aa12.32□□□□□ -0.44
NEDD4-212ENST00000557845 RNF183Q96D59 192 aa12.32□□□□□ -0.44
NEDD4-212ENST00000557845 ACY3Q96HD9 319 aa12.32□□□□□ -0.44
NEDD4-212ENST00000557845 NARS2Q96I59 477 aaKnown RBP12.32□□□□□ -0.44
NEDD4-212ENST00000557845 CSTL1Q9H114 145 aa12.32□□□□□ -0.44
NEDD4-212ENST00000557845 TMED3Q9Y3Q3 217 aa12.32□□□□□ -0.44
NEDD4-212ENST00000557845 NAP1L6A6NFF2 107 aa12.31□□□□□ -0.44
NEDD4-212ENST00000557845 GPX4P36969 197 aaPredicted RBP12.31□□□□□ -0.44
NEDD4-212ENST00000557845 DEFB131AP59861 70 aa12.31□□□□□ -0.44
NEDD4-212ENST00000557845 TRIQKQ629K1 86 aa12.31□□□□□ -0.44
NEDD4-212ENST00000557845 FAM24BQ8N5W8 94 aa12.31□□□□□ -0.44
NEDD4-212ENST00000557845 GRAMD2BQ96HH9 432 aa12.31□□□□□ -0.44
NEDD4-212ENST00000557845 SDHCQ99643 169 aaPredicted RBP12.31□□□□□ -0.44
NEDD4-212ENST00000557845 RABAC1Q9UI14 185 aa12.31□□□□□ -0.44
NEDD4-212ENST00000557845 DYNC2H1Q8NCM8 4307 aaKnown RBP12.31□□□□□ -0.44
NEDD4-212ENST00000557845 SACSQ9NZJ4 4579 aa12.31□□□□□ -0.44
NEDD4-212ENST00000557845 LCE6AA0A183 80 aa12.3□□□□□ -0.44
NEDD4-212ENST00000557845 FAM90A26D6RGX4 464 aa12.3□□□□□ -0.44
NEDD4-212ENST00000557845 K7EQG2 157 aa12.3□□□□□ -0.44
NEDD4-212ENST00000557845 NDUFB6O95139 128 aa12.3□□□□□ -0.44
NEDD4-212ENST00000557845 TOMM40O96008 361 aa12.3□□□□□ -0.44
NEDD4-212ENST00000557845 IL4P05112 153 aa12.3□□□□□ -0.44
NEDD4-212ENST00000557845 HNRNPCP07910 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
NEDD4-212ENST00000557845 HOXB5P09067 269 aa12.3□□□□□ -0.44
NEDD4-212ENST00000557845 RD3LP0DJH9 198 aa12.3□□□□□ -0.44
NEDD4-212ENST00000557845 UBE2MP61081 183 aaKnown RBP12.3□□□□□ -0.44
NEDD4-212ENST00000557845 USF2Q15853 346 aaPredicted RBP12.3□□□□□ -0.44
NEDD4-212ENST00000557845 RYR2Q92736 4967 aa12.3□□□□□ -0.44
NEDD4-212ENST00000557845 A0A0J9YWU9 116 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 MPTX1A8MV57 137 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 MED6O75586 246 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 PSG1P11464 419 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 RAB11AP62491 216 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 GAMTQ14353 236 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 LEMD1Q68G75 181 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 C16orf54Q6UWD8 224 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 STXBP6Q8NFX7 210 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 NDUFA13Q9P0J0 144 aa12.29□□□□□ -0.44
NEDD4-212ENST00000557845 LINC00854A0A1B0GVQ3 168 aa12.28□□□□□ -0.44
NEDD4-212ENST00000557845 C9orf170A2RU37 121 aa12.28□□□□□ -0.44
NEDD4-212ENST00000557845 IAPPP10997 89 aa12.28□□□□□ -0.44
NEDD4-212ENST00000557845 AP2S1P53680 142 aaPredicted RBP12.28□□□□□ -0.44
NEDD4-212ENST00000557845 GGNBP1Q5YKI7 109 aa12.28□□□□□ -0.44
NEDD4-212ENST00000557845 LYG2Q86SG7 212 aa12.28□□□□□ -0.44
NEDD4-212ENST00000557845 DCANP1Q8TF63 244 aa12.28□□□□□ -0.44
NEDD4-212ENST00000557845 GLMPQ8WWB7 406 aa12.28□□□□□ -0.44
NEDD4-212ENST00000557845 FLVCR2Q9UPI3 526 aa12.28□□□□□ -0.44
NEDD4-212ENST00000557845 TENM2Q9NT68 2774 aa12.27□□□□□ -0.44
NEDD4-212ENST00000557845 HELTA6NFD8 242 aa12.27□□□□□ -0.45
NEDD4-212ENST00000557845 ZFP92A6NM28 416 aa12.27□□□□□ -0.45
NEDD4-212ENST00000557845 CENPXA8MT69 81 aa12.27□□□□□ -0.45
NEDD4-212ENST00000557845 BUB3O43684 328 aa12.27□□□□□ -0.45
NEDD4-212ENST00000557845 SYNGR2O43760 224 aa12.27□□□□□ -0.45
NEDD4-212ENST00000557845 EIF2B2P49770 351 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms