RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ZNF705FA8MVS1 300 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 ZNF593O00488 134 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 DEGS1O15121 323 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 HMGB3O15347 200 aaKnown RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 ZNF207O43670 478 aaKnown RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 ENTPD6O75354 484 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 CDRT1O95170 752 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 MPZL1O95297 269 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 MMP7P09237 267 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 TRGC1P0CF51 173 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 ZNF705DP0CH99 300 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 ZNF705BP0CI00 300 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 PGA3P0DJD8 388 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 CDKN2BP42772 138 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 RHOBP62745 196 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 PLGLB1Q02325 96 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 SLC25A11Q02978 314 aaKnown RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 HSD52Q0P140 79 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 TMEM267Q0VDI3 215 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 PRDX4Q13162 271 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 OR2F1Q13607 317 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 MAD2L1BPQ15013 274 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 ATP6AP1LQ52LC2 224 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 NCBP2-AS2Q69YL0 99 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 TEX43Q6ZNM6 134 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 MUC15Q8N387 334 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 KCNRGQ8N5I3 272 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 ZNF439Q8NDP4 499 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 OR11G2Q8NGC1 345 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 OR4B1Q8NGF8 309 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 OR13C6PQ8NH95 151 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 OR2AE1Q8NHA4 323 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 LYPD6BQ8NI32 183 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 SFXN5Q8TD22 340 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 RAB8BQ92930 207 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 TSLPQ969D9 159 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 POP5Q969H6 163 aaKnown RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 FAM104AQ969W3 186 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 SLC25A46Q96AG3 418 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 APH1AQ96BI3 265 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 ACY3Q96HD9 319 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 LINC00167Q96N53 147 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 TSPAN32Q96QS1 320 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 DERL1Q9BUN8 251 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 TMEM126AQ9H061 195 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 FXYD6Q9H0Q3 95 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 ATG5Q9H1Y0 275 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 EXOSC4Q9NPD3 245 aaKnown RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 TMEM100Q9NV29 134 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 TXNL4BQ9NX01 149 aaKnown RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 UQCR10Q9UDW1 63 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 BOKQ9UMX3 212 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 PRRC2AP48634 2157 aaKnown RBP2.95□□□□□ -1.94
PRPF39-212ENST00000557477 CSMD2Q7Z408 3487 aa2.95□□□□□ -1.94
PRPF39-212ENST00000557477 CELSR1Q9NYQ6 3014 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 A0A087WWC5 75 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 A0A0G2JMM0 328 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 A0A1W2PPB8 328 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 TMEM189A5PLL7 270 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 SNRPGP15A8MWD9 76 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 KIR3DP1A8MWS1 328 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 FTCDNL1E5RQL4 147 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 C15orf65H3BRN8 121 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 H7BYZ3 331 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 GABRPO00591 440 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 ERI3O43414 337 aaKnown RBP2.94□□□□□ -1.94
PRPF39-212ENST00000557477 CHST1O43916 411 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 CREBL2O60519 120 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-212ENST00000557477 MAS1P04201 325 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 IL5P05113 134 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 C8orf88P0DMB2 117 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 COX6A1P12074 109 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 ALOX5APP20292 161 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 HIST1H1TP22492 207 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-212ENST00000557477 ATP6V0CP27449 155 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 GABRA3P34903 492 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 PRLHRP49683 370 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 RPS23P62266 143 aaKnown RBP2.94□□□□□ -1.94
PRPF39-212ENST00000557477 SLC35A1P78382 337 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 OR8B8Q15620 311 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 TMEM78Q5T7P6 136 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 GLT8D1Q68CQ7 371 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 Q6P435 159 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 AGTRAPQ6RW13 159 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 UNQ5815/PRO19632Q6UWF5 114 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 TIFABQ6ZNK6 161 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 ZNF493Q6ZR52 646 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 ZCCHC23Q6ZST2 131 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 NEGR1Q7Z3B1 354 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 OR5AR1Q8NGP9 310 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 BLNKQ8WV28 456 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 PSMF1Q92530 271 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 FAM3DQ96BQ1 224 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 FLYWCH2Q96CP2 140 aaKnown RBP2.94□□□□□ -1.94
PRPF39-212ENST00000557477 MUCL1Q96DR8 90 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 ZNF414Q96IQ9 312 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 DNAJC30Q96LL9 226 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 TRIB3Q96RU7 358 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 GPR22Q99680 433 aa2.94□□□□□ -1.94
PRPF39-212ENST00000557477 FOXC2Q99958 501 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms