RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GRAMD2BQ96HH9 432 aa10.12□□□□□ -0.79
SLIRP-210ENST00000557431 RNF126Q9BV68 326 aa10.12□□□□□ -0.79
SLIRP-210ENST00000557431 KRTAP4-5Q9BYR2 181 aa10.12□□□□□ -0.79
SLIRP-210ENST00000557431 FAM212BQ9NTI7 297 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-210ENST00000557431 MTFP1Q9UDX5 166 aa10.12□□□□□ -0.79
SLIRP-210ENST00000557431 A0A1W2PS18 150 aa10.11□□□□□ -0.79
SLIRP-210ENST00000557431 AMBPP02760 352 aa10.11□□□□□ -0.79
SLIRP-210ENST00000557431 UCP3P55916 312 aa10.11□□□□□ -0.79
SLIRP-210ENST00000557431 PIGPP57054 158 aa10.11□□□□□ -0.79
SLIRP-210ENST00000557431 POM121L12Q8N7R1 296 aa10.11□□□□□ -0.79
SLIRP-210ENST00000557431 RAB40CQ96S21 281 aa10.11□□□□□ -0.79
SLIRP-210ENST00000557431 SLIRPQ9GZT3 109 aaKnown RBP10.11□□□□□ -0.79
SLIRP-210ENST00000557431 HELTA6NFD8 242 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 NXPH3O95157 252 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 IGKV3-20P01619 116 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 EMP1P54849 157 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 MRPS10P82664 201 aaKnown RBP10.1□□□□□ -0.79
SLIRP-210ENST00000557431 Q6ZRM9 215 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 ZNF575Q86XF7 245 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 CENPSQ8N2Z9 138 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 OR4X1Q8NH49 305 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 GLMPQ8WWB7 406 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 DIRAS2Q96HU8 199 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 PDCD10Q9BUL8 212 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
SLIRP-210ENST00000557431 IGHV3OR16-12A0A075B7B8 117 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 GABARAPH6UMI1 98 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 CD3DP04234 171 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 MED14OSP0DP75 135 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 TBPP20226 339 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 RND2P52198 227 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 USF2Q15853 346 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-210ENST00000557431 TRIM16LQ309B1 348 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 TMEM41BQ5BJD5 291 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 RNASE10Q5GAN6 216 aaKnown RBP10.09□□□□□ -0.79
SLIRP-210ENST00000557431 GDF5OSQ5U4N7 250 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 C16orf54Q6UWD8 224 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 ENY2Q9NPA8 101 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 RABL2AQ9UBK7 228 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-210ENST00000557431 RABL2BQ9UNT1 228 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 U3KQE9 123 aa10.09□□□□□ -0.79
SLIRP-210ENST00000557431 C3orf85A0A1B0GTC6 90 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 CCDC160A6NGH7 325 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 FAM90A26D6RGX4 464 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 INS-IGF2F8WCM5 200 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 CORTO00230 105 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 CTDSPLO15194 276 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 HNRNPCP07910 306 aaKnown RBP eCLIP10.08□□□□□ -0.8
SLIRP-210ENST00000557431 IGLC1P0CG04 106 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 SUB1P53999 127 aaKnown RBP eCLIP10.08□□□□□ -0.8
SLIRP-210ENST00000557431 RND3P61587 244 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 DHODHQ02127 395 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 SSBP1Q04837 148 aaKnown RBP10.08□□□□□ -0.8
SLIRP-210ENST00000557431 LHFPL1Q86WI0 220 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 ARRDC1Q8N5I2 433 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 TMEM229BQ8NBD8 167 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 OR4D10Q8NGI6 311 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 MCFD2Q8NI22 146 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 RNASE11Q8TAA1 199 aaKnown RBP10.08□□□□□ -0.8
SLIRP-210ENST00000557431 NARS2Q96I59 477 aaKnown RBP10.08□□□□□ -0.8
SLIRP-210ENST00000557431 NDUFAF3Q9BU61 184 aa10.08□□□□□ -0.8
SLIRP-210ENST00000557431 RBM38Q9H0Z9 239 aaKnown RBP10.08□□□□□ -0.8
SLIRP-210ENST00000557431 CD74P04233 296 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 IL4P05112 153 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 P0DMU3 169 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 FAM231AP0DMU4 169 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 FAM231CP0DMU5 169 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 TNFSF8P32971 234 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 TAS2R19P59542 299 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 IL18Q14116 193 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 BSXQ3C1V8 233 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 PRSS54Q6PEW0 395 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 UBE2DNLQ8IWF7 75 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 LHFPL5Q8TAF8 219 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 TMEM170AQ8WVE7 144 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 SMIM4Q8WVI0 70 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 SOSTQ9BQB4 213 aa10.07□□□□□ -0.8
SLIRP-210ENST00000557431 H3BMM0 161 aa10.06□□□□□ -0.8
SLIRP-210ENST00000557431 ZNF701M0R085 212 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-210ENST00000557431 RAB3DO95716 219 aa10.06□□□□□ -0.8
SLIRP-210ENST00000557431 HTN3P15516 51 aa10.06□□□□□ -0.8
SLIRP-210ENST00000557431 OR10J1P30954 320 aa10.06□□□□□ -0.8
SLIRP-210ENST00000557431 MEF2DQ14814 521 aa10.06□□□□□ -0.8
SLIRP-210ENST00000557431 FAAP20Q6NZ36 180 aa10.06□□□□□ -0.8
SLIRP-210ENST00000557431 OR13C8Q8NGS7 320 aa10.06□□□□□ -0.8
SLIRP-210ENST00000557431 COPZ2Q9P299 210 aa10.06□□□□□ -0.8
SLIRP-210ENST00000557431 RSL24D1Q9UHA3 163 aaKnown RBP10.06□□□□□ -0.8
SLIRP-210ENST00000557431 HSPG2P98160 4391 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 ABCA13Q86UQ4 5058 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 GSTZ1O43708 216 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-210ENST00000557431 OR5AC1P0C628 307 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 UCP1P25874 307 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 SCGB2B2Q4G0G5 96 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 STEAP1BQ6NZ63 245 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 SIGLEC15Q6ZMC9 328 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 OR1S2Q8NGQ3 325 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 TERB2Q8NHR7 220 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 MARCH1Q8TCQ1 289 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 Q8WTZ3 238 aa10.05□□□□□ -0.8
SLIRP-210ENST00000557431 RRNAD1Q96FB5 475 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms