RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 YPEL3P61236 119 aaPredicted RBP11.57□□□□□ -0.56
TUBB3-213ENST00000557262 FAAP20Q6NZ36 180 aa11.57□□□□□ -0.56
TUBB3-213ENST00000557262 PRSS54Q6PEW0 395 aa11.57□□□□□ -0.56
TUBB3-213ENST00000557262 OR1S2Q8NGQ3 325 aa11.57□□□□□ -0.56
TUBB3-213ENST00000557262 RNASEH2CQ8TDP1 164 aaKnown RBP11.57□□□□□ -0.56
TUBB3-213ENST00000557262 C2CD4CQ8TF44 421 aa11.57□□□□□ -0.56
TUBB3-213ENST00000557262 DCANP1Q8TF63 244 aa11.57□□□□□ -0.56
TUBB3-213ENST00000557262 CACNG5Q9UF02 275 aa11.57□□□□□ -0.56
TUBB3-213ENST00000557262 HELTA6NFD8 242 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 KNCNA6PVL3 124 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 CEBPZOSA8MTT3 80 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 ZNF688P0C7X2 276 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 IGLC1P0CG04 106 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 SPP1P10451 314 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 RND2P52198 227 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 TMEM268Q5VZI3 342 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 Q8NAQ8 132 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 SMIM4Q8WVI0 70 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 HRH4Q9H3N8 390 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 CACFD1Q9UGQ2 172 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 TMEM56-RWDD3S4R434 201 aa11.56□□□□□ -0.56
TUBB3-213ENST00000557262 CRYM-AS1A6NIL9 109 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 HNRNPCP07910 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
TUBB3-213ENST00000557262 AKAIN1P0CW23 69 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 OR10J1P30954 320 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 DHRS2Q13268 280 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 ETFRF1Q6IPR1 90 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 C16orf54Q6UWD8 224 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 NOXA1Q86UR1 476 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 SLC24A4Q8NFF2 622 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 RABL2AQ9UBK7 228 aaPredicted RBP11.55□□□□□ -0.56
TUBB3-213ENST00000557262 RABL2BQ9UNT1 228 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 KCNIP3Q9Y2W7 256 aa11.55□□□□□ -0.56
TUBB3-213ENST00000557262 C11orf94C9JXX5 98 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 CTDSPLO15194 276 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 RBMY1A1P0DJD3 496 aaKnown RBP11.54□□□□□ -0.56
TUBB3-213ENST00000557262 RBMY1CP0DJD4 496 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 MIFP14174 115 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 SPCS2Q15005 226 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 RBMY1FQ15415 496 aaKnown RBP11.54□□□□□ -0.56
TUBB3-213ENST00000557262 ACTL10Q5JWF8 245 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 OR4C16Q8NGL9 310 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 GLMPQ8WWB7 406 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 DIRAS2Q96HU8 199 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 RAB40CQ96S21 281 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 PRRT1Q99946 306 aa11.54□□□□□ -0.56
TUBB3-213ENST00000557262 IGHV4-28A0A0C4DH34 117 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 ZNF705EA8MWA4 302 aaPredicted RBP11.53□□□□□ -0.56
TUBB3-213ENST00000557262 IGLL5B9A064 214 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 ALDH3B2P48448 385 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 IL18Q14116 193 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 OR51S1Q8NGJ8 323 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 TMEM170AQ8WVE7 144 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 NPIPB3Q92617 1050 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 IL22RA2Q969J5 263 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 MRPS26Q9BYN8 205 aaKnown RBP11.53□□□□□ -0.56
TUBB3-213ENST00000557262 DNAH10Q8IVF4 4471 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 AGRNO00468 2067 aa11.53□□□□□ -0.56
TUBB3-213ENST00000557262 IL4P05112 153 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 RD3LP0DJH9 198 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 SULT1A3P0DMM9 295 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 SULT1A4P0DMN0 295 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 NPY1RP25929 384 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 NMSQ5H8A3 153 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 PSMG4Q5JS54 123 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 CLVS1Q8IUQ0 354 aaPredicted RBP11.52□□□□□ -0.57
TUBB3-213ENST00000557262 CSNK1G2-AS1Q8NCQ2 148 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 SCGB3A2Q96PL1 93 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 APLNQ9ULZ1 77 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 U3KQ87 197 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 X6R8D5 127 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 VPS13DQ5THJ4 4388 aa11.52□□□□□ -0.57
TUBB3-213ENST00000557262 ANKRD20A5PA0PJZ0 165 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 BUB3O43684 328 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 NXPH3O95157 252 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 TOMM40O96008 361 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 IFNA10P01566 189 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 C4BPBP20851 252 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 HLA-DMBP28068 263 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 USF2Q15853 346 aaPredicted RBP11.51□□□□□ -0.57
TUBB3-213ENST00000557262 CENPSQ8N2Z9 138 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 ACY3Q96HD9 319 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 SEPSECSQ9HD40 501 aaKnown RBP11.51□□□□□ -0.57
TUBB3-213ENST00000557262 CLEC5AQ9NY25 188 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 SCP2D1Q9UJQ7 156 aa11.51□□□□□ -0.57
TUBB3-213ENST00000557262 ELOA3CA0A087WX78 387 aaPredicted RBP11.5□□□□□ -0.57
TUBB3-213ENST00000557262 GSTZ1O43708 216 aaPredicted RBP11.5□□□□□ -0.57
TUBB3-213ENST00000557262 CCR6P51684 374 aa11.5□□□□□ -0.57
TUBB3-213ENST00000557262 NUTF2P61970 127 aaKnown RBP11.5□□□□□ -0.57
TUBB3-213ENST00000557262 SNRPD3P62318 126 aaKnown RBP11.5□□□□□ -0.57
TUBB3-213ENST00000557262 PRR20EP86478 221 aa11.5□□□□□ -0.57
TUBB3-213ENST00000557262 PRR20CP86479 221 aa11.5□□□□□ -0.57
TUBB3-213ENST00000557262 PRR20DP86480 221 aa11.5□□□□□ -0.57
TUBB3-213ENST00000557262 PRR20BP86481 221 aa11.5□□□□□ -0.57
TUBB3-213ENST00000557262 PRR20AP86496 221 aa11.5□□□□□ -0.57
TUBB3-213ENST00000557262 NRN1Q9NPD7 142 aa11.5□□□□□ -0.57
TUBB3-213ENST00000557262 TBC1D24Q9ULP9 559 aa11.5□□□□□ -0.57
TUBB3-213ENST00000557262 DNAH6Q9C0G6 4158 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 A0A0B4J2A0 478 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms