RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SMIM4Q8WVI0 70 aa5.68□□□□□ -1.5
PTCSC3-201ENST00000556013 PRRT1Q99946 306 aa5.68□□□□□ -1.5
PTCSC3-201ENST00000556013 NAA60Q9H7X0 242 aa5.68□□□□□ -1.5
PTCSC3-201ENST00000556013 HEYLQ9NQ87 328 aaPredicted RBP5.68□□□□□ -1.5
PTCSC3-201ENST00000556013 PFDN2Q9UHV9 154 aa5.68□□□□□ -1.5
PTCSC3-201ENST00000556013 VPS13DQ5THJ4 4388 aa5.68□□□□□ -1.5
PTCSC3-201ENST00000556013 A0A0G2JRQ6 117 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 CRYM-AS1A6NIL9 109 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 BUB3O43684 328 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 GSTZ1O43708 216 aaPredicted RBP5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 HNRNPCP07910 306 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 GIG44P09565 113 aaPredicted RBP5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 OR5AC1P0C628 307 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 AKAIN1P0CW23 69 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 NUP62P37198 522 aaPredicted RBP5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 ALDH3B2P48448 385 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 NUTF2P61970 127 aaKnown RBP5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 SPINK9Q5DT21 86 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 NMSQ5H8A3 153 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 PRSS54Q6PEW0 395 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 CENPSQ8N2Z9 138 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 SLC24A4Q8NFF2 622 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 OR4D10Q8NGI6 311 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 GPR146Q96CH1 333 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 C1QTNF4Q9BXJ3 329 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 NAA50Q9GZZ1 169 aaKnown RBP5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 MIXL1Q9H2W2 232 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 MRPL36Q9P0J6 103 aaKnown RBP5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 RABAC1Q9UI14 185 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 SCP2D1Q9UJQ7 156 aa5.67□□□□□ -1.5
PTCSC3-201ENST00000556013 FRAS1Q86XX4 4008 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 A0A0B4J2A0 478 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 CEBPZOSA8MTT3 80 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 CTDSP2O14595 271 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 RGS5O15539 181 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 TOMM40O96008 361 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 OR10J1P30954 320 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 GPX4P36969 197 aaPredicted RBP5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 CCR6P51684 374 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 PPP5CP53041 499 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 NANOS2P60321 138 aaKnown RBP5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 SNRPD3P62318 126 aaKnown RBP5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 TIGITQ495A1 244 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 LEMD1Q68G75 181 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 GPR141Q7Z602 305 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 Q8NAQ8 132 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 CSNK1G2-AS1Q8NCQ2 148 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 STXBP6Q8NFX7 210 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 LHFPL5Q8TAF8 219 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 GLMPQ8WWB7 406 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 DEDD2Q8WXF8 326 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 DIRAS2Q96HU8 199 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 CLUHP3Q96NS8 147 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 RAB40CQ96S21 281 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 MRPS26Q9BYN8 205 aaKnown RBP5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 CACNG5Q9UF02 275 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 RSL24D1Q9UHA3 163 aaKnown RBP5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 SHPKQ9UHJ6 478 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 DNAH6Q9C0G6 4158 aa5.66□□□□□ -1.5
PTCSC3-201ENST00000556013 IGHV3-66A0A0C4DH42 116 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 DUXBA0A1W2PPF3 345 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 ANKRD20A5PA0PJZ0 165 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 CFDP00746 253 aaPredicted RBP5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 RD3LP0DJH9 198 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 SMIM18P0DKX4 95 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 SULT1A3P0DMM9 295 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 SULT1A4P0DMN0 295 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 ANXA3P12429 323 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 NPY1RP25929 384 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 RND2P52198 227 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 TMBIM6P55061 237 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 SRPXP78539 464 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 DHRS2Q13268 280 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 RNASE12Q5GAN4 147 aaKnown RBP5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 TMEM268Q5VZI3 342 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 OR8G2PQ6IF36 304 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 FAM24BQ8N5W8 94 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 OR51G1Q8NGK1 321 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 OR4C16Q8NGL9 310 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 RAB2BQ8WUD1 216 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 NPIPB3Q92617 1050 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 NEU1Q99519 415 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 SOSTQ9BQB4 213 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 NRN1Q9NPD7 142 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 HSPB7Q9UBY9 170 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 FBXL17Q9UF56 701 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 APLNQ9ULZ1 77 aa5.65□□□□□ -1.5
PTCSC3-201ENST00000556013 AGRNO00468 2067 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 TRAV10A0A0B4J240 114 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 SMIM9A6NGZ8 99 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 IL4P05112 153 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 FABP1P07148 127 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 ZNF688P0C7X2 276 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 RBMY1A1P0DJD3 496 aaKnown RBP5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 RBMY1CP0DJD4 496 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 PSG1P11464 419 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 SLC25A6P12236 298 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 NKX2-1P43699 371 aaPredicted RBP5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 KLF9Q13886 244 aaPredicted RBP5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 IL18Q14116 193 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms