RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 IGLC3P0DOY3 106 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 ESDP10768 282 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 DUSP1P28562 367 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 HNRNPA3P51991 378 aaKnown RBP3.13□□□□□ -1.91
LINC00648-202ENST00000555985 AESQ08117 197 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 TMEM41BQ5BJD5 291 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 MINOS1Q5TGZ0 78 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 Q6ZN92 141 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 LINC00311Q8N616 119 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 ZNF709Q8N972 641 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 OR52M1Q8NGK5 317 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 SSMEM1Q8WWF3 244 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 H1FXQ92522 213 aaKnown RBP3.13□□□□□ -1.91
LINC00648-202ENST00000555985 DYRK2Q92630 601 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 ST6GALNAC6Q969X2 333 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 HSPB9Q9BQS6 159 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 TMEM133Q9H2Q1 129 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 C11orf1Q9H5F2 150 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 MANBALQ9NQG1 85 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 BET1LQ9NYM9 111 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 VPREB3Q9UKI3 123 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 MRPS16Q9Y3D3 137 aaKnown RBP3.13□□□□□ -1.91
LINC00648-202ENST00000555985 PXMP4Q9Y6I8 212 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 MINOS1-NBL1R4GNA1 71 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 IGSF23A1L1A6 192 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 K7ERU9 68 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 DEGS1O15121 323 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 CHST1O43916 411 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 CDS2O95674 445 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 SNU13P55769 128 aaKnown RBP3.13□□□□□ -1.91
LINC00648-202ENST00000555985 RPL23P62829 140 aaKnown RBP3.13□□□□□ -1.91
LINC00648-202ENST00000555985 PRB3Q04118 309 aaPredicted RBP3.13□□□□□ -1.91
LINC00648-202ENST00000555985 TMEM187Q14656 261 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 GNMTQ14749 295 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 VAMP3Q15836 100 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 SPATA45Q537H7 98 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 GLIPR1L1Q6UWM5 242 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 LYZL2Q7Z4W2 148 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 TPRX1Q8N7U7 411 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 LRTM2Q8N967 370 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 MRPL30Q8TCC3 161 aaKnown RBP3.13□□□□□ -1.91
LINC00648-202ENST00000555985 WFDC12Q8WWY7 111 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 CFHR4Q92496 578 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 TXN2Q99757 166 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 SMIM7Q9BQ49 75 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 ST6GALNAC5Q9BVH7 336 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 ZNF286AQ9HBT8 521 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 MRPL27Q9P0M9 148 aaKnown RBP3.13□□□□□ -1.91
LINC00648-202ENST00000555985 TRAPPC1Q9Y5R8 145 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 ATRQ13535 2644 aa3.13□□□□□ -1.91
LINC00648-202ENST00000555985 COL6A5A8TX70 2615 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 PRKDCP78527 4128 aaKnown RBP3.12□□□□□ -1.91
LINC00648-202ENST00000555985 KBTBD11O94819 623 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 MPIG6BO95866 241 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 IL3RAP26951 378 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 HINT1P49773 126 aaPredicted RBP3.12□□□□□ -1.91
LINC00648-202ENST00000555985 PROK1P58294 105 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 RUNX1Q01196 453 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 ARFRP1Q13795 201 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 EBI3Q14213 229 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 SP6Q3SY56 376 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 PRR27Q6MZM9 219 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 LGI3Q8N145 548 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 Q8N6K4 173 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 Q8N976 141 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 OR5AU1Q8NGC0 362 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 MBD3L1Q8WWY6 194 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 ARHGAP5-AS1Q96IT6 56 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 CITED1Q99966 193 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 TP53TG3Q9ULZ0 132 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 CEBPZOSA8MTT3 80 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 BUB1B-PAK6H3BSN5 160 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 AMY1AP04745 511 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 PSG1P11464 419 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 AADACP22760 399 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 OMGP23515 440 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 TSPOP30536 169 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 LINC00310P59036 64 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 TAS2R30P59541 319 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 ARL6IP1Q15041 203 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 MSMO1Q15800 293 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 HLA-DRB5Q30154 266 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 TMEM30BQ3MIR4 351 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 PRAMEF5Q5TYX0 476 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 KCNIP4Q6PIL6 250 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 ODF3L1Q8IXM7 274 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 TMEM252Q8N6L7 170 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 OR5C1Q8NGR4 320 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 PINX1Q96BK5 328 aaKnown RBP3.12□□□□□ -1.91
LINC00648-202ENST00000555985 BTF3L4Q96K17 158 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 CLEC7AQ9BXN2 247 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 NAA60Q9H7X0 242 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 SLC35D1Q9NTN3 355 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 CALYQ9NYX4 217 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 IDI2-AS1Q9NZ38 188 aa3.12□□□□□ -1.91
LINC00648-202ENST00000555985 PKD1L1Q8TDX9 2849 aa3.11□□□□□ -1.91
LINC00648-202ENST00000555985 TRGV10A0A0A0MS01 117 aa3.11□□□□□ -1.91
LINC00648-202ENST00000555985 DUXBA0A1W2PPF3 345 aa3.11□□□□□ -1.91
LINC00648-202ENST00000555985 A0A1W2PPI3 338 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms