RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 RNASEH2CQ8TDP1 164 aaKnown RBP14.37□□□□□ -0.11
PRKCH-219ENST00000555906 RTBDNQ9BSG5 229 aaPredicted RBP14.37□□□□□ -0.11
PRKCH-219ENST00000555906 HRH4Q9H3N8 390 aa14.37□□□□□ -0.11
PRKCH-219ENST00000555906 HEYLQ9NQ87 328 aaPredicted RBP14.37□□□□□ -0.11
PRKCH-219ENST00000555906 CRYM-AS1A6NIL9 109 aa14.36□□□□□ -0.11
PRKCH-219ENST00000555906 DISC1C4P0D8 188 aa14.36□□□□□ -0.11
PRKCH-219ENST00000555906 DEFB4AO15263 64 aa14.36□□□□□ -0.11
PRKCH-219ENST00000555906 RGS5O15539 181 aa14.36□□□□□ -0.11
PRKCH-219ENST00000555906 GIG44P09565 113 aaPredicted RBP14.36□□□□□ -0.11
PRKCH-219ENST00000555906 ZNF688P0C7X2 276 aa14.36□□□□□ -0.11
PRKCH-219ENST00000555906 C4BPBP20851 252 aa14.36□□□□□ -0.11
PRKCH-219ENST00000555906 EIF2B2P49770 351 aaKnown RBP14.36□□□□□ -0.11
PRKCH-219ENST00000555906 PRSS54Q6PEW0 395 aa14.36□□□□□ -0.11
PRKCH-219ENST00000555906 SELENOHQ8IZQ5 122 aaKnown RBP14.36□□□□□ -0.11
PRKCH-219ENST00000555906 C2CD4CQ8TF44 421 aa14.36□□□□□ -0.11
PRKCH-219ENST00000555906 U3KQE9 123 aa14.36□□□□□ -0.11
PRKCH-219ENST00000555906 HELTA6NFD8 242 aa14.35□□□□□ -0.11
PRKCH-219ENST00000555906 RND2P52198 227 aa14.35□□□□□ -0.11
PRKCH-219ENST00000555906 YPEL3P61236 119 aaPredicted RBP14.35□□□□□ -0.11
PRKCH-219ENST00000555906 TMEM268Q5VZI3 342 aa14.35□□□□□ -0.11
PRKCH-219ENST00000555906 OR4C16Q8NGL9 310 aa14.35□□□□□ -0.11
PRKCH-219ENST00000555906 GLMPQ8WWB7 406 aa14.35□□□□□ -0.11
PRKCH-219ENST00000555906 CACFD1Q9UGQ2 172 aa14.35□□□□□ -0.11
PRKCH-219ENST00000555906 ZNF705EA8MWA4 302 aaPredicted RBP14.34□□□□□ -0.11
PRKCH-219ENST00000555906 C11orf94C9JXX5 98 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 CTDSPLO15194 276 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 HNRNPCP07910 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRKCH-219ENST00000555906 AKAIN1P0CW23 69 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 MIFP14174 115 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 OR10J1P30954 320 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 GPR141Q7Z602 305 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 Q8WTZ3 238 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 GPR146Q96CH1 333 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 PRRT1Q99946 306 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 MRPS26Q9BYN8 205 aaKnown RBP14.34□□□□□ -0.11
PRKCH-219ENST00000555906 RABL2AQ9UBK7 228 aaPredicted RBP14.34□□□□□ -0.11
PRKCH-219ENST00000555906 RABL2BQ9UNT1 228 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 GPR132Q9UNW8 380 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 TMEM56-RWDD3S4R434 201 aa14.34□□□□□ -0.11
PRKCH-219ENST00000555906 IGHV4-28A0A0C4DH34 117 aa14.33□□□□□ -0.12
PRKCH-219ENST00000555906 KNCNA6PVL3 124 aa14.33□□□□□ -0.12
PRKCH-219ENST00000555906 CEBPZOSA8MTT3 80 aa14.33□□□□□ -0.12
PRKCH-219ENST00000555906 CTDSP2O14595 271 aa14.33□□□□□ -0.12
PRKCH-219ENST00000555906 NPY1RP25929 384 aa14.33□□□□□ -0.12
PRKCH-219ENST00000555906 ETFRF1Q6IPR1 90 aa14.33□□□□□ -0.12
PRKCH-219ENST00000555906 C16orf54Q6UWD8 224 aa14.33□□□□□ -0.12
PRKCH-219ENST00000555906 TMEM170AQ8WVE7 144 aa14.33□□□□□ -0.12
PRKCH-219ENST00000555906 IL22RA2Q969J5 263 aa14.33□□□□□ -0.12
PRKCH-219ENST00000555906 ALDH3B2P48448 385 aa14.32□□□□□ -0.12
PRKCH-219ENST00000555906 AP2S1P53680 142 aaPredicted RBP14.32□□□□□ -0.12
PRKCH-219ENST00000555906 DHRS2Q13268 280 aa14.32□□□□□ -0.12
PRKCH-219ENST00000555906 SPCS2Q15005 226 aa14.32□□□□□ -0.12
PRKCH-219ENST00000555906 USF2Q15853 346 aaPredicted RBP14.32□□□□□ -0.12
PRKCH-219ENST00000555906 ACTL10Q5JWF8 245 aa14.32□□□□□ -0.12
PRKCH-219ENST00000555906 NOXA1Q86UR1 476 aa14.32□□□□□ -0.12
PRKCH-219ENST00000555906 IL4P05112 153 aa14.31□□□□□ -0.12
PRKCH-219ENST00000555906 RBMY1A1P0DJD3 496 aaKnown RBP14.31□□□□□ -0.12
PRKCH-219ENST00000555906 RBMY1CP0DJD4 496 aa14.31□□□□□ -0.12
PRKCH-219ENST00000555906 SULT1A3P0DMM9 295 aa14.31□□□□□ -0.12
PRKCH-219ENST00000555906 SULT1A4P0DMN0 295 aa14.31□□□□□ -0.12
PRKCH-219ENST00000555906 IL18Q14116 193 aa14.31□□□□□ -0.12
PRKCH-219ENST00000555906 RBMY1FQ15415 496 aaKnown RBP14.31□□□□□ -0.12
PRKCH-219ENST00000555906 NMSQ5H8A3 153 aa14.31□□□□□ -0.12
PRKCH-219ENST00000555906 CCDC59Q9P031 241 aaKnown RBP14.31□□□□□ -0.12
PRKCH-219ENST00000555906 X6R8D5 127 aa14.31□□□□□ -0.12
PRKCH-219ENST00000555906 GSTZ1O43708 216 aaPredicted RBP14.3□□□□□ -0.12
PRKCH-219ENST00000555906 TOMM40O96008 361 aa14.3□□□□□ -0.12
PRKCH-219ENST00000555906 PSMG4Q5JS54 123 aa14.3□□□□□ -0.12
PRKCH-219ENST00000555906 CLVS1Q8IUQ0 354 aaPredicted RBP14.3□□□□□ -0.12
PRKCH-219ENST00000555906 OR51S1Q8NGJ8 323 aa14.3□□□□□ -0.12
PRKCH-219ENST00000555906 DIRAS2Q96HU8 199 aa14.3□□□□□ -0.12
PRKCH-219ENST00000555906 SEPSECSQ9HD40 501 aaKnown RBP14.3□□□□□ -0.12
PRKCH-219ENST00000555906 ANKRD20A5PA0PJZ0 165 aa14.29□□□□□ -0.12
PRKCH-219ENST00000555906 NXPH3O95157 252 aa14.29□□□□□ -0.12
PRKCH-219ENST00000555906 SNRPD3P62318 126 aaKnown RBP14.29□□□□□ -0.12
PRKCH-219ENST00000555906 CSNK1G2-AS1Q8NCQ2 148 aa14.29□□□□□ -0.12
PRKCH-219ENST00000555906 NPIPB3Q92617 1050 aa14.29□□□□□ -0.12
PRKCH-219ENST00000555906 ACY3Q96HD9 319 aa14.29□□□□□ -0.12
PRKCH-219ENST00000555906 RAB40CQ96S21 281 aa14.29□□□□□ -0.12
PRKCH-219ENST00000555906 NRN1Q9NPD7 142 aa14.29□□□□□ -0.12
PRKCH-219ENST00000555906 TBC1D24Q9ULP9 559 aa14.29□□□□□ -0.12
PRKCH-219ENST00000555906 APLNQ9ULZ1 77 aa14.29□□□□□ -0.12
PRKCH-219ENST00000555906 FAM90A26D6RGX4 464 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 NUP62P37198 522 aaPredicted RBP14.28□□□□□ -0.12
PRKCH-219ENST00000555906 PRR20EP86478 221 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 PRR20CP86479 221 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 PRR20DP86480 221 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 PRR20BP86481 221 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 PRR20AP86496 221 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 SIGLEC15Q6ZMC9 328 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 DYNC2LI1Q8TCX1 351 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 RAB2BQ8WUD1 216 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 HSPB7Q9UBY9 170 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 SCP2D1Q9UJQ7 156 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 KCNIP3Q9Y2W7 256 aa14.28□□□□□ -0.12
PRKCH-219ENST00000555906 A0A0B4J2A0 478 aa14.27□□□□□ -0.13
PRKCH-219ENST00000555906 IGLL5B9A064 214 aa14.27□□□□□ -0.13
PRKCH-219ENST00000555906 BUB3O43684 328 aa14.27□□□□□ -0.13
PRKCH-219ENST00000555906 RD3LP0DJH9 198 aa14.27□□□□□ -0.13
PRKCH-219ENST00000555906 HLA-DMBP28068 263 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms