RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 RNF183Q96D59 192 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 NARS2Q96I59 477 aaKnown RBP8.76□□□□□ -1.01
VRK1-204ENST00000555351 METTL26Q96S19 204 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 MAP6D1Q9H9H5 199 aa8.76□□□□□ -1.01
VRK1-204ENST00000555351 MRPL36Q9P0J6 103 aaKnown RBP8.76□□□□□ -1.01
VRK1-204ENST00000555351 CCDC160A6NGH7 325 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 IGLC1P0CG04 106 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 UBE2MP61081 183 aaKnown RBP8.75□□□□□ -1.01
VRK1-204ENST00000555351 SPANXN2Q5MJ10 180 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 LYZL2Q7Z4W2 148 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 DTD1Q8TEA8 209 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 Q8WTZ3 238 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 TMEM170AQ8WVE7 144 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 GRAMD2BQ96HH9 432 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 MS4A6AQ9H2W1 248 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 U3KQE9 123 aa8.75□□□□□ -1.01
VRK1-204ENST00000555351 IGHV3-49A0A0A0MS15 119 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 FAM90A26D6RGX4 464 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 DNASE2O00115 360 aaPredicted RBP8.74□□□□□ -1.01
VRK1-204ENST00000555351 PITX3O75364 302 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 APOHP02749 345 aaPredicted RBP8.74□□□□□ -1.01
VRK1-204ENST00000555351 OR10J1P30954 320 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 GPX4P36969 197 aaPredicted RBP8.74□□□□□ -1.01
VRK1-204ENST00000555351 EIF2B2P49770 351 aaKnown RBP8.74□□□□□ -1.01
VRK1-204ENST00000555351 RND2P52198 227 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 MLANAQ16655 118 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 GATAD1Q8WUU5 269 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 CSTL1Q9H114 145 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 TMED3Q9Y3Q3 217 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 CSMD3Q7Z407 3707 aa8.74□□□□□ -1.01
VRK1-204ENST00000555351 HELTA6NFD8 242 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 NAP1L6A6NFF2 107 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 MPTX1A8MV57 137 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 IFNA10P01566 189 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 P2RY1P47900 373 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 AP2S1P53680 142 aaPredicted RBP8.73□□□□□ -1.01
VRK1-204ENST00000555351 RBMS2Q15434 407 aaKnown RBP8.73□□□□□ -1.01
VRK1-204ENST00000555351 TIGITQ495A1 244 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 APRG1Q8IVJ8 170 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 LILRB2Q8N423 598 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 TMEM217Q8N7C4 229 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 RBKSQ9H477 322 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 SEPSECSQ9HD40 501 aaKnown RBP8.73□□□□□ -1.01
VRK1-204ENST00000555351 RYR3Q15413 4870 aa8.73□□□□□ -1.01
VRK1-204ENST00000555351 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 IGHV3OR16-13A0A075B7E8 117 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 IGHV3-74A0A0B4J1X5 117 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 K7EQG2 157 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 MED6O75586 246 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 JTBO76095 146 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 TOMM40O96008 361 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 HNRNPCP07910 306 aaKnown RBP eCLIP8.72□□□□□ -1.01
VRK1-204ENST00000555351 NUP62P37198 522 aaPredicted RBP8.72□□□□□ -1.01
VRK1-204ENST00000555351 TFPI2P48307 235 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 RPL11P62913 178 aaKnown RBP8.72□□□□□ -1.01
VRK1-204ENST00000555351 DEFB135Q30KP9 77 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 TMEM41BQ5BJD5 291 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 TMED4Q7Z7H5 227 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 GBGT1Q8N5D6 347 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 OR1S1Q8NH92 325 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 CIB3Q96Q77 187 aaPredicted RBP8.72□□□□□ -1.01
VRK1-204ENST00000555351 PRR13Q9NZ81 148 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 PFDN2Q9UHV9 154 aa8.72□□□□□ -1.01
VRK1-204ENST00000555351 DYNC2H1Q8NCM8 4307 aaKnown RBP8.72□□□□□ -1.01
VRK1-204ENST00000555351 IGKV3-7A0A075B6H7 116 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 SFT2D2O95562 160 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 FABP1P07148 127 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 RD3LP0DJH9 198 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 RPL35AP18077 110 aaKnown RBP8.71□□□□□ -1.02
VRK1-204ENST00000555351 VAMP1P23763 118 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 C16orf54Q6UWD8 224 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 LYG2Q86SG7 212 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 CENPSQ8N2Z9 138 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 DCANP1Q8TF63 244 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 NPIPB3Q92617 1050 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 SRRQ9GZT4 340 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 NDUFA13Q9P0J0 144 aa8.71□□□□□ -1.02
VRK1-204ENST00000555351 IGHV3-66A0A0C4DH42 116 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 A0A0J9YWU9 116 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 NXPH3O95157 252 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 IFNA4P05014 189 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 IL4P05112 153 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 DEFB131AP59861 70 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 RAB11AP62491 216 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 RPP30P78346 268 aaKnown RBP8.7□□□□□ -1.02
VRK1-204ENST00000555351 CNPY1Q3B7I2 92 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 OR8G2PQ6IF36 304 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 OR51G1Q8NGK1 321 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 GLMPQ8WWB7 406 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 ACY3Q96HD9 319 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 C7orf50Q9BRJ6 194 aaKnown RBP8.7□□□□□ -1.02
VRK1-204ENST00000555351 RABAC1Q9UI14 185 aa8.7□□□□□ -1.02
VRK1-204ENST00000555351 NUPR2A6NF83 97 aa8.69□□□□□ -1.02
VRK1-204ENST00000555351 NDUFB6O95139 128 aa8.69□□□□□ -1.02
VRK1-204ENST00000555351 CFDP00746 253 aaPredicted RBP8.69□□□□□ -1.02
VRK1-204ENST00000555351 SPP1P10451 314 aa8.69□□□□□ -1.02
VRK1-204ENST00000555351 PSG1P11464 419 aa8.69□□□□□ -1.02
VRK1-204ENST00000555351 INPP1P49441 399 aa8.69□□□□□ -1.02
VRK1-204ENST00000555351 PPP1R1AQ13522 171 aa8.69□□□□□ -1.02
VRK1-204ENST00000555351 USF2Q15853 346 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms