RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 AESQ08117 197 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 POU2AF1Q16633 256 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 TMEM200BQ69YZ2 307 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 OR8G2PQ6IF36 304 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 ZNF343Q6P1L6 599 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 OR5AU1Q8NGC0 362 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 OR51G1Q8NGK1 321 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 OR13A1Q8NGR1 328 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 MRGPRDQ8TDS7 321 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 SDSLQ96GA7 329 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 OR6C3Q9NZP0 311 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 BIRC6Q9NR09 4857 aa9.06□□□□□ -0.96
VPS33B-204ENST00000554660 TRAV9-1A0A075B6T8 112 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 IFITM10A6NMD0 228 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 H7BYZ3 331 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 IFNA10P01566 189 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 TRGC2P03986 189 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 TRGC1P0CF51 173 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
VPS33B-204ENST00000554660 CD1BP29016 333 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 GPR12P47775 334 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 FGF8P55075 233 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-204ENST00000554660 ZNF816Q0VGE8 651 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-204ENST00000554660 MORN2Q502X0 79 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 TCTEX1D4Q5JR98 221 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 KCNIP4Q6PIL6 250 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 TMEM183AQ8IXX5 376 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 CD177Q8N6Q3 437 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 RAB24Q969Q5 203 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 B9D2Q9BPU9 175 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 PARLQ9H300 379 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 LINC00574Q9H8X3 128 aa9.05□□□□□ -0.96
VPS33B-204ENST00000554660 LINC00473A8K010 186 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 ODF3BA8MYP8 253 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 LINC00587B1AMM8 73 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 PRSS46E5RG02 174 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 ADIRFQ15847 76 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 Q3ZCU0 254 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 KHDC1LQ5JSQ8 128 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 OR4S2Q8NH73 311 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 ABHD5Q8WTS1 349 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 DDB2Q92466 427 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 FRZBQ92765 325 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 CORO2AQ92828 525 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 PFDN5Q99471 154 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 SLC25A22Q9H936 323 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 TBL2Q9Y4P3 447 aaKnown RBP9.04□□□□□ -0.96
VPS33B-204ENST00000554660 LY96Q9Y6Y9 160 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 URGCP-MRPS24S4R325 110 aa9.04□□□□□ -0.96
VPS33B-204ENST00000554660 DYNC2H1Q8NCM8 4307 aaKnown RBP9.04□□□□□ -0.96
VPS33B-204ENST00000554660 TCRBV4S1A1TA0A5B7 111 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 PPP5D1E7EU14 171 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 YIF1AO95070 293 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 CGB3P0DN86 165 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 CGB7P0DN87 165 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 SSTR5P35346 364 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 GALR1P47211 349 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 THBS3P49746 956 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 DLX6P56179 175 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 EGFEM1PQ0D2K5 195 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 PYY3Q5JQD4 70 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 PRAMEF5Q5TYX0 476 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 C10orf99Q6UWK7 81 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 C16orf82Q7Z2V1 217 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 OR4A16Q8NH70 328 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 TMEM170AQ8WVE7 144 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 PSG11Q9UQ72 335 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 FOXA2Q9Y261 457 aaPredicted RBP9.03□□□□□ -0.96
VPS33B-204ENST00000554660 HILPDAQ9Y5L2 63 aa9.03□□□□□ -0.96
VPS33B-204ENST00000554660 TSSC4Q9Y5U2 329 aaPredicted RBP9.03□□□□□ -0.96
VPS33B-204ENST00000554660 CXorf1O96002 111 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 MT-CO2P00403 227 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 STAG3L2P0CL84 134 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 STAG3L3P0CL85 134 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 OR4X1Q8NH49 305 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 S1PR3Q99500 378 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 IFI27L2Q9H2X8 130 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 GFOD1Q9NXC2 390 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 GNG12Q9UBI6 72 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 ZMAT5Q9UDW3 170 aaKnown RBP9.02□□□□□ -0.97
VPS33B-204ENST00000554660 ZNF257Q9Y2Q1 563 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 LSM4Q9Y4Z0 139 aaKnown RBP9.02□□□□□ -0.97
VPS33B-204ENST00000554660 SACSQ9NZJ4 4579 aa9.02□□□□□ -0.97
VPS33B-204ENST00000554660 A0A1W2PPV4 95 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 SH2D7A6NKC9 451 aaPredicted RBP9.01□□□□□ -0.97
VPS33B-204ENST00000554660 C15orf61A6NNL5 157 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 C11orf94C9JXX5 98 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 ST8SIA5O15466 376 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 RBMXL2O75526 392 aaKnown RBP9.01□□□□□ -0.97
VPS33B-204ENST00000554660 OR9G9P0C7N8 305 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 RAB31Q13636 194 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 ACTL10Q5JWF8 245 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 LINC00482Q8N8I6 264 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 OR11H6Q8NGC7 330 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 OR2T10Q8NGZ9 312 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 UBALD1Q8TB05 177 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 DPF1Q92782 380 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 C11orf52Q96A22 123 aa9.01□□□□□ -0.97
VPS33B-204ENST00000554660 QTRT1Q9BXR0 403 aaKnown RBP9.01□□□□□ -0.97
VPS33B-204ENST00000554660 NPVFQ9HCQ7 196 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms