RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 SSNA1O43805 119 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 YIF1AO95070 293 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 TMEM50AO95807 157 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 CD5P06127 495 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 RNASE2P10153 161 aaKnown RBP6.52□□□□□ -1.37
ACTN1-213ENST00000554508 SLC25A6P12236 298 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 BMI1P35226 326 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 TNFRSF9Q07011 255 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 IAH1Q2TAA2 248 aaPredicted RBP6.52□□□□□ -1.37
ACTN1-213ENST00000554508 OR10C1Q96KK4 312 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 FAM110AQ9BQ89 295 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 GINS3Q9BRX5 216 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 WFDC10AQ9H1F0 79 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 RBKSQ9H477 322 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 GSKIPQ9P0R6 139 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 HSPB7Q9UBY9 170 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 SMPXQ9UHP9 88 aa6.52□□□□□ -1.37
ACTN1-213ENST00000554508 CSMD3Q7Z407 3707 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 CHEK1O14757 476 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 ZNF207O43670 478 aaKnown RBP6.51□□□□□ -1.37
ACTN1-213ENST00000554508 PITX3O75364 302 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 SCGB2A1O75556 95 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 SCGB1D2O95969 90 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 HTR2BP41595 481 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 CMC4P56277 68 aaPredicted RBP6.51□□□□□ -1.37
ACTN1-213ENST00000554508 BSXQ3C1V8 233 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 GSG1LQ6UXU4 331 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 ZNF600Q6ZNG1 722 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 TMEM116Q8NCL8 245 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 IL17DQ8TAD2 202 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 DTD1Q8TEA8 209 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 RHPN1-AS1Q9BWJ2 59 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 GGTLC1Q9BX51 225 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 MAGT1Q9H0U3 335 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 ALG5Q9Y673 324 aa6.51□□□□□ -1.37
ACTN1-213ENST00000554508 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 LYSTQ99698 3801 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 IGHV3OR16-8A0A075B7F1 116 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 TRAV30A0A087WSZ9 112 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 FAM90A26D6RGX4 464 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 WRBO00258 174 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 GOSR2O14653 212 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 CLN5O75503 358 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 MED6O75586 246 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 IGHV3-48P01763 117 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 OPRK1P41145 380 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 NKX2-1P43699 371 aaPredicted RBP6.5□□□□□ -1.37
ACTN1-213ENST00000554508 TOMM20LQ6UXN7 152 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 NOXA1Q86UR1 476 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 ZBTB8BQ8NAP8 495 aaPredicted RBP6.5□□□□□ -1.37
ACTN1-213ENST00000554508 OR4X1Q8NH49 305 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 RNF2Q99496 336 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 TMEM231Q9H6L2 316 aa6.5□□□□□ -1.37
ACTN1-213ENST00000554508 STARD9Q9P2P6 4700 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 RPS10-NUDT3A0A1W2PQS6 291 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 C7orf66A4D0T2 115 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 UBE2CO00762 179 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 SYNGR2O43760 224 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 SSSCA1O60232 199 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 SIX6O95475 246 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 IFNA10P01566 189 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 IAPPP10997 89 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 APOC4P55056 127 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 PAFAH1B2P68402 229 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 OXA1LQ15070 435 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 C2orf83Q53S99 150 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 FAM90A2PQ658T7 463 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 SLC24A4Q8NFF2 622 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 OR4D5Q8NGN0 318 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 RNASEH2CQ8TDP1 164 aaKnown RBP6.49□□□□□ -1.37
ACTN1-213ENST00000554508 C2orf50Q96LR7 162 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 FNDC4Q9H6D8 234 aaPredicted RBP6.49□□□□□ -1.37
ACTN1-213ENST00000554508 RETNQ9HD89 108 aa6.49□□□□□ -1.37
ACTN1-213ENST00000554508 PAIP2BQ9ULR5 123 aaKnown RBP6.49□□□□□ -1.37
ACTN1-213ENST00000554508 PUS1Q9Y606 427 aaKnown RBP eCLIP6.49□□□□□ -1.37
ACTN1-213ENST00000554508 KIR2DL5BA0A0G2JN68 375 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 KIR2DL5BA0A0G2JPC4 375 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 A0A1W2PS18 150 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 SLC25A4P12235 298 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 NPPCP23582 126 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 NPY1RP25929 384 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 ATP5IP56385 69 aaPredicted RBP6.48□□□□□ -1.37
ACTN1-213ENST00000554508 S100A10P60903 97 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 POLR2GP62487 172 aaKnown RBP eCLIP6.48□□□□□ -1.37
ACTN1-213ENST00000554508 RPP30P78346 268 aaKnown RBP6.48□□□□□ -1.37
ACTN1-213ENST00000554508 ID3Q02535 119 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 MLANAQ16655 118 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 ODF3L2Q3SX64 289 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 ETFRF1Q6IPR1 90 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 Q6ZWC4 215 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 TCF24Q7RTU0 167 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 KIR2DL5AQ8N109 375 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 KIR2DL5BQ8NHK3 375 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 CIB3Q96Q77 187 aaPredicted RBP6.48□□□□□ -1.37
ACTN1-213ENST00000554508 OVOL2Q9BRP0 275 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 MED28Q9H204 178 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 VSIRQ9H7M9 311 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 ZFAND3Q9H8U3 227 aa6.48□□□□□ -1.37
ACTN1-213ENST00000554508 MGAT4CQ9UBM8 478 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms