RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MTFP1Q9UDX5 166 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 TCF19Q9Y242 345 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 CSAG2Q9Y5P2 127 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 PXMP4Q9Y6I8 212 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 LRP4O75096 1905 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 ACANP16112 2415 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 NSD1Q96L73 2696 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 FBN1P35555 2871 aaKnown RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 A0A0D9SEW6 157 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 K7EM74 188 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 CCL22O00626 93 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 ISLRO14498 428 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 ATP5LO75964 103 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 SLC25A14O95258 325 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 CA2P00918 260 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 HLA-DQA2P01906 255 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 HBE1P02100 147 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 GYPAP02724 150 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 LIFP15018 202 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 RPL35AP18077 110 aaKnown RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 PFN3P60673 137 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 RPL15P61313 204 aaKnown RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 POLR2LP62875 67 aaKnown RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 SPANXN4Q5MJ08 99 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 FRG2Q64ET8 278 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 FAM90A2PQ658T7 463 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 C12orf73Q69YU5 71 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 TRIM40Q6P9F5 258 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 SLC25A34Q6PIV7 304 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 TMEM64Q6YI46 380 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF841Q6ZN19 808 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 GOLT1AQ6ZVE7 132 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 MSRB3Q8IXL7 192 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 SLC22A18ASQ8N1D0 253 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 TMEM256Q8N2U0 113 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 CYB561D1Q8N8Q1 229 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 ZFP62Q8NB50 900 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 SCCPDHQ8NBX0 429 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 APCDD1LQ8NCL9 501 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 OR11H6Q8NGC7 330 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 OR4K13Q8NH42 304 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 SCGB1C1Q8TD33 95 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 APOBEC4Q8WW27 367 aaKnown RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 RTN4IP1Q8WWV3 396 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 NEIL2Q969S2 332 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 SLC25A38Q96DW6 304 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 LINC00477Q96M19 166 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 FRG2BQ96QU4 278 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 VGLL1Q99990 258 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 SFXN3Q9BWM7 321 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 TM2D1Q9BX74 207 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 ISG20L2Q9H9L3 353 aaKnown RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 SDF2L1Q9HCN8 221 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 C1orf123Q9NWV4 160 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 C1RLQ9NZP8 487 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 LSM7Q9UK45 103 aaKnown RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 TRAPPC1Q9Y5R8 145 aa3.57□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF469Q96JG9 3925 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-227ENST00000554491 POLEQ07864 2286 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 TRAV9-1A0A075B6T8 112 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 TRAV5A0A0B4J249 113 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 LOC102725191A0A1B0GVB3 256 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 C5orf49A4QMS7 147 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 GGTLC3B5MD39 225 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 FAM90A26D6RGX4 464 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 H0YL77 283 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 H3BUT2 72 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 NTN3O00634 580 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-227ENST00000554491 SH2D1BO14796 132 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 OR1I1O60431 355 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 ZIC3O60481 467 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 KLF7O75840 302 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-227ENST00000554491 CXorf1O96002 111 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 IGKV3-20P01619 116 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 P04436 131 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 PIRTP0C851 137 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 IGLC6P0CF74 106 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 AADACP22760 399 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 PRSS3P35030 304 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 RBMXP38159 391 aaKnown RBP3.56□□□□□ -1.84
ATXN3-227ENST00000554491 VDAC2P45880 294 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-227ENST00000554491 GALR1P47211 349 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 SMIM11AP58511 58 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 KRTDAPP60985 99 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 RPS24P62847 133 aaKnown RBP3.56□□□□□ -1.84
ATXN3-227ENST00000554491 TGFBR3Q03167 851 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 ATP5G2Q06055 141 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 ATXN7L3Q14CW9 347 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-227ENST00000554491 CD226Q15762 336 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 ENTPD8Q5MY95 495 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 RPL7L1Q6DKI1 246 aaKnown RBP3.56□□□□□ -1.84
ATXN3-227ENST00000554491 NOXRED1Q6NXP6 359 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF322Q6U7Q0 402 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-227ENST00000554491 CD164L2Q6UWJ8 174 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 Q6ZSR3 168 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 FAM19A1Q7Z5A9 133 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 ABHD12Q8N2K0 398 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 OR10J6PQ8NGY7 276 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 MRPL30Q8TCC3 161 aaKnown RBP3.56□□□□□ -1.84
ATXN3-227ENST00000554491 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms