RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TCTAP57738 103 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 YPEL3P61236 119 aaPredicted RBP13.68□□□□□ -0.22
CPSF2-203ENST00000554290 TMEM268Q5VZI3 342 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 ETFRF1Q6IPR1 90 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 GPR141Q7Z602 305 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
CPSF2-203ENST00000554290 NOXA1Q86UR1 476 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 LHFPL5Q8TAF8 219 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 C2CD4CQ8TF44 421 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 SMIM4Q8WVI0 70 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 GPR146Q96CH1 333 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 RABL2AQ9UBK7 228 aaPredicted RBP13.68□□□□□ -0.22
CPSF2-203ENST00000554290 RABL2BQ9UNT1 228 aa13.68□□□□□ -0.22
CPSF2-203ENST00000554290 CRYM-AS1A6NIL9 109 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 HNRNPCP07910 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
CPSF2-203ENST00000554290 IGLC1P0CG04 106 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 OR10J1P30954 320 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 RND2P52198 227 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 PRSS54Q6PEW0 395 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 SLC24A4Q8NFF2 622 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 DCANP1Q8TF63 244 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 PRRT1Q99946 306 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 GPR132Q9UNW8 380 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 KCNIP3Q9Y2W7 256 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 U3KQE9 123 aa13.67□□□□□ -0.22
CPSF2-203ENST00000554290 C11orf94C9JXX5 98 aa13.66□□□□□ -0.22
CPSF2-203ENST00000554290 DEDDO75618 318 aa13.66□□□□□ -0.22
CPSF2-203ENST00000554290 DHRS2Q13268 280 aa13.66□□□□□ -0.22
CPSF2-203ENST00000554290 CENPSQ8N2Z9 138 aa13.66□□□□□ -0.22
CPSF2-203ENST00000554290 Q8NAQ8 132 aa13.66□□□□□ -0.22
CPSF2-203ENST00000554290 OR4C16Q8NGL9 310 aa13.66□□□□□ -0.22
CPSF2-203ENST00000554290 MRPS26Q9BYN8 205 aaKnown RBP13.66□□□□□ -0.22
CPSF2-203ENST00000554290 HRH4Q9H3N8 390 aa13.66□□□□□ -0.22
CPSF2-203ENST00000554290 TMEM56-RWDD3S4R434 201 aa13.66□□□□□ -0.22
CPSF2-203ENST00000554290 KNCNA6PVL3 124 aa13.65□□□□□ -0.22
CPSF2-203ENST00000554290 CTDSPLO15194 276 aa13.65□□□□□ -0.22
CPSF2-203ENST00000554290 GIG44P09565 113 aaPredicted RBP13.65□□□□□ -0.22
CPSF2-203ENST00000554290 MIFP14174 115 aa13.65□□□□□ -0.22
CPSF2-203ENST00000554290 IL18Q14116 193 aa13.65□□□□□ -0.22
CPSF2-203ENST00000554290 SPCS2Q15005 226 aa13.65□□□□□ -0.22
CPSF2-203ENST00000554290 ACTL10Q5JWF8 245 aa13.65□□□□□ -0.22
CPSF2-203ENST00000554290 C16orf54Q6UWD8 224 aa13.65□□□□□ -0.22
CPSF2-203ENST00000554290 IL22RA2Q969J5 263 aa13.65□□□□□ -0.22
CPSF2-203ENST00000554290 DIRAS2Q96HU8 199 aa13.65□□□□□ -0.22
CPSF2-203ENST00000554290 IGHV4-28A0A0C4DH34 117 aa13.64□□□□□ -0.23
CPSF2-203ENST00000554290 SULT1A3P0DMM9 295 aa13.64□□□□□ -0.23
CPSF2-203ENST00000554290 SULT1A4P0DMN0 295 aa13.64□□□□□ -0.23
CPSF2-203ENST00000554290 NPY1RP25929 384 aa13.64□□□□□ -0.23
CPSF2-203ENST00000554290 CLVS1Q8IUQ0 354 aaPredicted RBP13.64□□□□□ -0.23
CPSF2-203ENST00000554290 OR51S1Q8NGJ8 323 aa13.64□□□□□ -0.23
CPSF2-203ENST00000554290 GLMPQ8WWB7 406 aa13.64□□□□□ -0.23
CPSF2-203ENST00000554290 SCGB3A2Q96PL1 93 aa13.64□□□□□ -0.23
CPSF2-203ENST00000554290 GSTZ1O43708 216 aaPredicted RBP13.63□□□□□ -0.23
CPSF2-203ENST00000554290 IFNA10P01566 189 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 IL4P05112 153 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 RD3LP0DJH9 198 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 ALDH3B2P48448 385 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 SNRPD3P62318 126 aaKnown RBP13.63□□□□□ -0.23
CPSF2-203ENST00000554290 NMSQ5H8A3 153 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 PSMG4Q5JS54 123 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 NPIPB3Q92617 1050 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 ACY3Q96HD9 319 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 RAB40CQ96S21 281 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 SCP2D1Q9UJQ7 156 aa13.63□□□□□ -0.23
CPSF2-203ENST00000554290 ZNF705EA8MWA4 302 aaPredicted RBP13.62□□□□□ -0.23
CPSF2-203ENST00000554290 IGLL5B9A064 214 aa13.62□□□□□ -0.23
CPSF2-203ENST00000554290 NXPH3O95157 252 aa13.62□□□□□ -0.23
CPSF2-203ENST00000554290 RBMY1A1P0DJD3 496 aaKnown RBP13.62□□□□□ -0.23
CPSF2-203ENST00000554290 RBMY1CP0DJD4 496 aa13.62□□□□□ -0.23
CPSF2-203ENST00000554290 C4BPBP20851 252 aa13.62□□□□□ -0.23
CPSF2-203ENST00000554290 NUTF2P61970 127 aaKnown RBP13.62□□□□□ -0.23
CPSF2-203ENST00000554290 RBMY1FQ15415 496 aaKnown RBP13.62□□□□□ -0.23
CPSF2-203ENST00000554290 USF2Q15853 346 aaPredicted RBP13.62□□□□□ -0.23
CPSF2-203ENST00000554290 TMEM170AQ8WVE7 144 aa13.62□□□□□ -0.23
CPSF2-203ENST00000554290 SEPSECSQ9HD40 501 aaKnown RBP13.62□□□□□ -0.23
CPSF2-203ENST00000554290 TBC1D24Q9ULP9 559 aa13.62□□□□□ -0.23
CPSF2-203ENST00000554290 U3KQ87 197 aa13.62□□□□□ -0.23
CPSF2-203ENST00000554290 ANKRD20A5PA0PJZ0 165 aa13.61□□□□□ -0.23
CPSF2-203ENST00000554290 TOMM40O96008 361 aa13.61□□□□□ -0.23
CPSF2-203ENST00000554290 RAB2BQ8WUD1 216 aa13.61□□□□□ -0.23
CPSF2-203ENST00000554290 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
CPSF2-203ENST00000554290 NRN1Q9NPD7 142 aa13.61□□□□□ -0.23
CPSF2-203ENST00000554290 CCDC59Q9P031 241 aaKnown RBP13.61□□□□□ -0.23
CPSF2-203ENST00000554290 RSL24D1Q9UHA3 163 aaKnown RBP13.61□□□□□ -0.23
CPSF2-203ENST00000554290 PFDN2Q9UHV9 154 aa13.61□□□□□ -0.23
CPSF2-203ENST00000554290 FAM90A26D6RGX4 464 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 BUB3O43684 328 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 HLA-DMBP28068 263 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 NUP62P37198 522 aaPredicted RBP13.6□□□□□ -0.23
CPSF2-203ENST00000554290 CCR6P51684 374 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 SIGLEC15Q6ZMC9 328 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 DTD1Q8TEA8 209 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 CLEC5AQ9NY25 188 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 HSPB7Q9UBY9 170 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 APLNQ9ULZ1 77 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 X6R8D5 127 aa13.6□□□□□ -0.23
CPSF2-203ENST00000554290 TRAV10A0A0B4J240 114 aa13.59□□□□□ -0.23
CPSF2-203ENST00000554290 A0A0B4J2A0 478 aa13.59□□□□□ -0.23
CPSF2-203ENST00000554290 PSG1P11464 419 aa13.59□□□□□ -0.23
CPSF2-203ENST00000554290 ANXA3P12429 323 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms