RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 DOCK3Q8IZD9 2030 aa0.62□□□□□ -2.31
USP44-207ENST00000552237 MYO3BQ8WXR4 1341 aa0.62□□□□□ -2.31
USP44-207ENST00000552237 FBN2P35556 2912 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 NOTCH1P46531 2555 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 SCN8AQ9UQD0 1980 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 TMEM210A6NLX4 147 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 TMEM212A6NML5 194 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 EVPLLA8MZ36 301 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 C1orf196B1AJZ1 125 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 G3V2T6 193 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 FAAHO00519 579 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 GEMIN2O14893 280 aaKnown RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 HMGB3O15347 200 aaKnown RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 CST8O60676 142 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 ATP5HO75947 161 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 UBL3O95164 117 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 IFNA14P01570 189 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 IFNA4P05014 189 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 CTSDP07339 412 aaPredicted RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 OR4E1P0C645 316 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 SMIM17P0DL12 118 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 MGST1P10620 155 aaKnown RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 HIST1H1TP22492 207 aaPredicted RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 VBP1P61758 197 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 AESQ08117 197 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 FADDQ13158 208 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 KRR1Q13601 381 aaKnown RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 GUK1Q16774 197 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 IAH1Q2TAA2 248 aaPredicted RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 TEX36Q5VZQ5 186 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 EIF5AL1Q6IS14 154 aaKnown RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 TMED4Q7Z7H5 227 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 SIGLECL1Q8N7X8 197 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 LINC00301Q8NCQ3 95 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 ST6GALNAC3Q8NDV1 305 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 SGMS2Q8NHU3 365 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 NEK7Q8TDX7 302 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 SFT2D1Q8WV19 159 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 H1FXQ92522 213 aaKnown RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 LINC00526Q96FQ7 95 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 PPP1R2P1Q96PQ5 205 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 SIGMAR1Q99720 223 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 C20orf27Q9GZN8 174 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 IMUPQ9GZP8 106 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 DCSTAMPQ9H295 470 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 ENY2Q9NPA8 101 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 OPTCQ9UBM4 332 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 ARL5AQ9Y689 179 aa0.61□□□□□ -2.31
USP44-207ENST00000552237 MYO18AQ92614 2054 aaKnown RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 ASCC3Q8N3C0 2202 aaKnown RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 TNRC6AQ8NDV7 1962 aaKnown RBP0.61□□□□□ -2.31
USP44-207ENST00000552237 MYLKQ15746 1914 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 CEP192Q8TEP8 1941 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 GPR98Q8WXG9 6306 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 NINQ8N4C6 2090 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 IGLV3-32A0A0A0MS00 114 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 TRBV6-7A0A0A0MS04 114 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 TRAV26-2A0A0B4J265 109 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 hADV38S2A0JD32 116 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 IBA57-AS1B1ANH7 110 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 TRAPPC2LH3BP13 241 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 KPNA3O00505 521 aaPredicted RBP0.6□□□□□ -2.31
USP44-207ENST00000552237 CHP2O43745 196 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 BANF1O75531 89 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 OR2J2O76002 312 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 OR7C1O76099 320 aaPredicted RBP0.6□□□□□ -2.31
USP44-207ENST00000552237 SMIM10L2AP0DMW4 78 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 SMIM10L2BP0DMW5 78 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 SPTBP11277 2137 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 CCL5P13501 91 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 CCL1P22362 96 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 PPP1R2P41236 205 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 TCTAP57738 103 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 CCL7P80098 99 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 TNFAIP6P98066 277 aaPredicted RBP0.6□□□□□ -2.31
USP44-207ENST00000552237 BRMS1LQ5PSV4 323 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 ZNF826PQ6ZT77 177 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 TEN1Q86WV5 123 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 ZNF565Q8N9K5 539 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 C9orf163Q8N9P6 203 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 SLC30A7Q8NEW0 376 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 OR8J2Q8NGG1 315 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 OR8D4Q8NGM9 314 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 AQP3Q92482 292 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 BORCS5Q969J3 196 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 MALSU1Q96EH3 234 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 ZNF714Q96N38 554 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 GPER1Q99527 375 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 MAP1LC3BQ9GZQ8 125 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 C11orf68Q9H3H3 251 aaKnown RBP0.6□□□□□ -2.31
USP44-207ENST00000552237 C14orf105Q9NVL8 296 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 LAMTOR3Q9UHA4 124 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 SSR3Q9UNL2 185 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 COQ4Q9Y3A0 265 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 LY96Q9Y6Y9 160 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 FMN1Q68DA7 1419 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 SETD5Q9C0A6 1442 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 SBF1O95248 1867 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 PLB1Q6P1J6 1458 aa0.6□□□□□ -2.31
USP44-207ENST00000552237 EML5Q05BV3 1969 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms