RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 IGHV2-70DA0A0C4DH43 119 aa12.15□□□□□ -0.46
PDE1B-207ENST00000550620 SSBP2P81877 361 aaPredicted RBP12.15□□□□□ -0.46
PDE1B-207ENST00000550620 TIMM23BQ5SRD1 257 aa12.15□□□□□ -0.46
PDE1B-207ENST00000550620 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.46
PDE1B-207ENST00000550620 TMEM167AQ8TBQ9 72 aa12.15□□□□□ -0.46
PDE1B-207ENST00000550620 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
PDE1B-207ENST00000550620 KLF12Q9Y4X4 402 aa12.15□□□□□ -0.46
PDE1B-207ENST00000550620 TRAV17A0A0B4J275 112 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 CORTO00230 105 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 REG1BP48304 166 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 CCL11P51671 97 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 GNG5P63218 68 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 C3orf36Q3SXR2 165 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 LRRC10Q5BKY1 277 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 SSX8Q7RTT4 187 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 OR4C5Q8NGB2 326 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 OR5AN1Q8NGI8 311 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 RNASE8Q8TDE3 154 aaKnown RBP12.15□□□□□ -0.47
PDE1B-207ENST00000550620 CLEC5AQ9NY25 188 aa12.15□□□□□ -0.47
PDE1B-207ENST00000550620 RBX1P62877 108 aa12.14□□□□□ -0.47
PDE1B-207ENST00000550620 OR4C13Q8NGP0 309 aa12.14□□□□□ -0.47
PDE1B-207ENST00000550620 FMC1Q96HJ9 113 aa12.14□□□□□ -0.47
PDE1B-207ENST00000550620 URB1-AS1Q96HZ7 61 aa12.14□□□□□ -0.47
PDE1B-207ENST00000550620 FNDC4Q9H6D8 234 aaPredicted RBP12.14□□□□□ -0.47
PDE1B-207ENST00000550620 IGKV1D-37A0A075B6S9 117 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 HSBP1L1C9JCN9 74 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 SYS1-DBNDD2H3BUS1 97 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 LEPROTL1O95214 131 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 FSTL3O95633 263 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 P01737 135 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 ETFRF1Q6IPR1 90 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 ZNF841Q6ZN19 808 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 TCF24Q7RTU0 167 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 GFRA4Q9GZZ7 299 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 TMEM191AQ9H0A3 160 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 ZNRD1Q9P1U0 126 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 ZNF492Q9P255 531 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 MED13Q9UHV7 2174 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 TRAV30A0A087WSZ9 112 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 PGPA6NDG6 321 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 VWC2LB2RUY7 222 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 OR5AL1P0C617 328 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 WT1-ASQ06250 92 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 FAM120AOSQ5T036 256 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 Q6ZVH6 145 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 KIR3DL3Q8N743 410 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 FDCSPQ8NFU4 85 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 DAZAP1Q96EP5 407 aaKnown RBP12.13□□□□□ -0.47
PDE1B-207ENST00000550620 MLST8Q9BVC4 326 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 AHCTF1Q8WYP5 2266 aa12.13□□□□□ -0.47
PDE1B-207ENST00000550620 IGHV1-24A0A0C4DH33 117 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 IGHV1-46P01743 117 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 CDKN1BP46527 198 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 MEF2CQ06413 473 aaPredicted RBP12.12□□□□□ -0.47
PDE1B-207ENST00000550620 TEX36Q5VZQ5 186 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 SPATA12Q7Z6I5 190 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 ZCCHC24Q8N2G6 241 aaKnown RBP12.12□□□□□ -0.47
PDE1B-207ENST00000550620 C5orf17Q8NAS9 161 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 PRSS22Q9GZN4 317 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 PRO3102Q9H379 93 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 FAM186AA6NE01 2351 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 MBD3L4A6NDZ8 208 aaPredicted RBP12.12□□□□□ -0.47
PDE1B-207ENST00000550620 MBD3L3A6NE82 208 aaPredicted RBP12.12□□□□□ -0.47
PDE1B-207ENST00000550620 MBD3L5A6NJ08 208 aaPredicted RBP12.12□□□□□ -0.47
PDE1B-207ENST00000550620 E7EUB6 86 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 MOSP00540 346 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 VAMP3Q15836 100 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 SAPCD1Q5SSQ6 148 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 FAM71F2Q6NXP2 309 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 SLC25A34Q6PIV7 304 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 MBD3L2Q8NHZ7 208 aaPredicted RBP12.12□□□□□ -0.47
PDE1B-207ENST00000550620 RPH3ALQ9UNE2 315 aa12.12□□□□□ -0.47
PDE1B-207ENST00000550620 LOC105371242A0A075B767 164 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 PLAUP00749 431 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 LIPFP07098 398 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 ORM2P19652 201 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 FOXA3P55318 350 aaPredicted RBP12.11□□□□□ -0.47
PDE1B-207ENST00000550620 IGFL2Q6UWQ7 119 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 RBPMS2Q6ZRY4 209 aaKnown RBP12.11□□□□□ -0.47
PDE1B-207ENST00000550620 OR1B1Q8NGR6 318 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 OR10X1Q8NGY0 326 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 C19orf71A6NCJ1 209 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 CHEK1O14757 476 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 LTAP01374 205 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 NBEAP1P0C6P0 100 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 ANKRD39Q53RE8 183 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 C12orf54Q6X4T0 127 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 PGLYRP4Q96LB8 373 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 MAP1LC3CQ9BXW4 147 aa12.11□□□□□ -0.47
PDE1B-207ENST00000550620 CGB1A6NKQ9 187 aa12.1□□□□□ -0.47
PDE1B-207ENST00000550620 RPS20P60866 119 aaKnown RBP12.1□□□□□ -0.47
PDE1B-207ENST00000550620 MPV17L2Q567V2 206 aa12.1□□□□□ -0.47
PDE1B-207ENST00000550620 PET117Q6UWS5 81 aa12.1□□□□□ -0.47
PDE1B-207ENST00000550620 NDFIP1Q9BT67 221 aa12.1□□□□□ -0.47
PDE1B-207ENST00000550620 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
PDE1B-207ENST00000550620 C10orf55Q5SWW7 151 aa12.09□□□□□ -0.47
PDE1B-207ENST00000550620 GTSF1Q8WW33 167 aa12.09□□□□□ -0.47
PDE1B-207ENST00000550620 ST6GALNAC6Q969X2 333 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms