RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PAPPA-AS1Q5QFB9 102 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 FANCMQ8IYD8 2048 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 IGLV3-12A0A075B6K2 115 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 TRAV8-2A0A0B4J237 113 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 TM4SF5O14894 197 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 DPM2O94777 84 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 TGFAP01135 160 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 Q0VG73 95 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 GAGE13Q4V321 117 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 NABP1Q96AH0 204 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 PNRC2Q9NPJ4 139 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 A0A1W2PS18 150 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 IQCF6A8MYZ5 107 aa13.14□□□□□ -0.31
RBFOX1-212ENST00000550418 CD5LO43866 347 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 SS18L1O75177 396 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 OR5AN1Q8NGI8 311 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 SAA2-SAA4A0A096LPE2 208 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 A0A0G2JRQ6 117 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 CECR9P0C854 216 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 SAA2P0DJI9 122 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 FGFBP3Q8TAT2 258 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 TCRBV4S1A1TA0A5B7 111 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 CDKN1AP38936 164 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 ERVK11-1P61568 191 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 C5orf24Q7Z6I8 188 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 IMMP1LQ96LU5 166 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 CLEC7AQ9BXN2 247 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 MRPL20Q9BYC9 149 aaKnown RBP13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 A0A0G2JMM0 328 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 A0A1W2PPB8 328 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 KIR3DP1A8MWS1 328 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 SYS1-DBNDD2H3BUS1 97 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 GLRXP35754 106 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 PRCDQ00LT1 54 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 GAGE1Q13065 139 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 FAM201AQ5SY85 155 aa13.13□□□□□ -0.31
RBFOX1-212ENST00000550418 KLRB1Q12918 225 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 GUSBP1Q15486 140 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 Q6ZRM9 215 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 MGST2Q99735 147 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 M0R381 172 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 OCIAD2Q56VL3 154 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 FAM216BQ8N7L0 139 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 ZIC4Q8N9L1 334 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 TMEM262E9PQX1 116 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 PPP1R17O96001 155 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 FAM106CPP0CH98 169 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 ESDP10768 282 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 PHF3Q92576 2039 aaKnown RBP13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 GTSF1LQ9H1H1 148 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 ZNF581Q9P0T4 197 aa13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 FOXA2Q9Y261 457 aaPredicted RBP13.12□□□□□ -0.31
RBFOX1-212ENST00000550418 NOTCH4Q99466 2003 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 TRAV5A0A0B4J249 113 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 PPIAL4CA0A0B4J2A2 164 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 ITGB1BP1O14713 200 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 PPBPP02775 128 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 PPIAL4GP0DN37 164 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 FAM90A1Q86YD7 464 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 FBXL15Q9H469 300 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 CST9LQ9H4G1 147 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 FOXF2Q12947 444 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 FBXL7Q9UJT9 491 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 LILRA1O75019 489 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 HOXA3O43365 443 aaPredicted RBP13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 NPPCP23582 126 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 FAM74A4Q5TZK3 123 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 SLC25A48Q6ZT89 311 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 DMRTC2Q8IXT2 367 aaPredicted RBP13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 BCL6BQ8N143 479 aaPredicted RBP13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 VKORC1Q9BQB6 163 aa13.11□□□□□ -0.31
RBFOX1-212ENST00000550418 EBLN2Q6P2I7 272 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 NUP35Q8NFH5 326 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 COPS9Q8WXC6 57 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 CDX4O14627 284 aaPredicted RBP13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 CELA3BP08861 270 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 IGLC2P0DOY2 106 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 IGLC3P0DOY3 106 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 Q6ZS49 121 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 PTPRDP23468 1912 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 IGHV3OR16-13A0A075B7E8 117 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 IGHV3-74A0A0B4J1X5 117 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 TMEM42Q69YG0 159 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 ANAPC10Q9UM13 185 aa13.1□□□□□ -0.31
RBFOX1-212ENST00000550418 FOXH1O75593 365 aa13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 IGKCP01834 107 aa13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 C19orf54Q5BKX5 351 aa13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 CYSLTR1Q9Y271 337 aa13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 GEMIN7Q9H840 131 aaKnown RBP13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 DOCK9Q9BZ29 2069 aa13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 MRPL14Q6P1L8 145 aaKnown RBP13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 S4R3C0 116 aa13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 FABP5P3A8MUU1 101 aa13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 CKS1BP61024 79 aa13.09□□□□□ -0.31
RBFOX1-212ENST00000550418 PLAURQ03405 335 aa13.08□□□□□ -0.31
RBFOX1-212ENST00000550418 PRR31Q5SQ13 230 aa13.08□□□□□ -0.31
RBFOX1-212ENST00000550418 CDPF1Q6NVV7 123 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms