RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 PNRC1Q12796 327 aaPredicted RBP16.61■□□□□ 0.25
PRDM4-205ENST00000550376 NANPQ8TBE9 248 aa16.61■□□□□ 0.25
PRDM4-205ENST00000550376 ANKRD17O75179 2603 aaKnown RBP16.61■□□□□ 0.25
PRDM4-205ENST00000550376 RPS10P46783 165 aaKnown RBP16.61■□□□□ 0.25
PRDM4-205ENST00000550376 LEMD1Q68G75 181 aa16.61■□□□□ 0.25
PRDM4-205ENST00000550376 C16orf82Q7Z2V1 217 aa16.61■□□□□ 0.25
PRDM4-205ENST00000550376 NPBQ8NG41 125 aa16.61■□□□□ 0.25
PRDM4-205ENST00000550376 SLC25A2Q9BXI2 301 aa16.61■□□□□ 0.25
PRDM4-205ENST00000550376 ZNF355PQ9NSJ1 428 aa16.61■□□□□ 0.25
PRDM4-205ENST00000550376 PDE6DO43924 150 aa16.6■□□□□ 0.25
PRDM4-205ENST00000550376 C10orf113Q5VZT2 155 aa16.6■□□□□ 0.25
PRDM4-205ENST00000550376 THAP8Q8NA92 274 aa16.6■□□□□ 0.25
PRDM4-205ENST00000550376 OR5AU1Q8NGC0 362 aa16.6■□□□□ 0.25
PRDM4-205ENST00000550376 FAM167A-AS1Q96KT0 104 aa16.6■□□□□ 0.25
PRDM4-205ENST00000550376 SOX21Q9Y651 276 aaPredicted RBP16.6■□□□□ 0.25
PRDM4-205ENST00000550376 NDUFA3O95167 84 aa16.6■□□□□ 0.25
PRDM4-205ENST00000550376 TMEM11P17152 192 aa16.6■□□□□ 0.25
PRDM4-205ENST00000550376 ELOVL1Q9BW60 279 aa16.6■□□□□ 0.25
PRDM4-205ENST00000550376 CSPG4Q6UVK1 2322 aa16.59■□□□□ 0.25
PRDM4-205ENST00000550376 CLN5O75503 358 aa16.59■□□□□ 0.25
PRDM4-205ENST00000550376 UBE2E1P51965 193 aa16.59■□□□□ 0.25
PRDM4-205ENST00000550376 CCDC144NLQ6NUI1 221 aa16.59■□□□□ 0.25
PRDM4-205ENST00000550376 BRD3OSQ6XYD6 125 aa16.59■□□□□ 0.25
PRDM4-205ENST00000550376 MRPL41Q8IXM3 137 aaKnown RBP16.59■□□□□ 0.25
PRDM4-205ENST00000550376 C8orf88P0DMB2 117 aa16.59■□□□□ 0.25
PRDM4-205ENST00000550376 FLI1Q01543 452 aaPredicted RBP16.59■□□□□ 0.25
PRDM4-205ENST00000550376 PVRIGQ6DKI7 326 aa16.59■□□□□ 0.25
PRDM4-205ENST00000550376 LINC00305Q7Z4B0 112 aa16.59■□□□□ 0.25
PRDM4-205ENST00000550376 B4DEV8 164 aa16.58■□□□□ 0.25
PRDM4-205ENST00000550376 COL8A1P27658 744 aa16.58■□□□□ 0.25
PRDM4-205ENST00000550376 ASPHD1Q5U4P2 390 aa16.58■□□□□ 0.25
PRDM4-205ENST00000550376 TMEM116Q8NCL8 245 aa16.58■□□□□ 0.25
PRDM4-205ENST00000550376 CENPVL3A0A0U1RRI6 287 aa16.58■□□□□ 0.24
PRDM4-205ENST00000550376 I3L2K1 104 aa16.58■□□□□ 0.24
PRDM4-205ENST00000550376 SUMO1P63165 101 aaKnown RBP16.58■□□□□ 0.24
PRDM4-205ENST00000550376 ETFRF1Q6IPR1 90 aa16.58■□□□□ 0.24
PRDM4-205ENST00000550376 C10orf105Q8TEF2 133 aa16.58■□□□□ 0.24
PRDM4-205ENST00000550376 PIMREGQ9BSJ6 248 aa16.58■□□□□ 0.24
PRDM4-205ENST00000550376 C1orf196B1AJZ1 125 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 H3BTX0 84 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 CLDN34H7C241 214 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 CRYBB3P26998 211 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 MINOS1Q5TGZ0 78 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 LINC01551Q86U37 167 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 MINOS1-NBL1R4GNA1 71 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 GGTLC3B5MD39 225 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 IGHV3-23P01764 117 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 TIGITQ495A1 244 aa16.57■□□□□ 0.24
PRDM4-205ENST00000550376 FOLR2P14207 255 aa16.56■□□□□ 0.24
PRDM4-205ENST00000550376 UBE2L3P68036 154 aaKnown RBP16.56■□□□□ 0.24
PRDM4-205ENST00000550376 Q8N6K4 173 aa16.56■□□□□ 0.24
PRDM4-205ENST00000550376 NBPF19A0A087WUL8 3843 aa16.56■□□□□ 0.24
PRDM4-205ENST00000550376 K7EIM0 57 aa16.56■□□□□ 0.24
PRDM4-205ENST00000550376 SNRPEP62304 92 aaKnown RBP16.56■□□□□ 0.24
PRDM4-205ENST00000550376 F6UZH7 168 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 PSG1P11464 419 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 TAS2R45P59539 299 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 CLEC2AQ6UVW9 174 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 PQLC2Q6ZP29 291 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 OCC1Q8TAD7 63 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 C22orf15Q8WYQ4 148 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 ARPC1AQ92747 370 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 MALSU1Q96EH3 234 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 HSPB9Q9BQS6 159 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 PRB4P10163 310 aaPredicted RBP16.55■□□□□ 0.24
PRDM4-205ENST00000550376 RAB5BP61020 215 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 ZNF562Q6V9R5 426 aa16.55■□□□□ 0.24
PRDM4-205ENST00000550376 LINC01548A6NM66 108 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 NPFFO15130 113 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 IGLC1P0CG04 106 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 TMEM219Q86XT9 240 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 LINC00479Q96M42 142 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 RPL35P42766 123 aaKnown RBP16.54■□□□□ 0.24
PRDM4-205ENST00000550376 LYZP61626 148 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 SELENOTP62341 195 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 BLNKQ8WV28 456 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 RBM14Q96PK6 669 aaKnown RBP16.54■□□□□ 0.24
PRDM4-205ENST00000550376 C19orf24Q9BVV8 132 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 TMEM167BQ9NRX6 74 aa16.54■□□□□ 0.24
PRDM4-205ENST00000550376 CXorf65A6NEN9 183 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 FAM106CPP0CH98 169 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 Q8N9W7 124 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 TRGV9Q99603 122 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 PAXXQ9BUH6 204 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 TENM4Q6N022 2769 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 NAV2Q8IVL1 2488 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 H7BYZ3 331 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 AKR1D1P51857 326 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 OR1L4Q8NGR5 311 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 SPOCK3Q9BQ16 436 aa16.53■□□□□ 0.24
PRDM4-205ENST00000550376 IGHV7-81A0A0B4J1V7 117 aa16.52■□□□□ 0.24
PRDM4-205ENST00000550376 TRAV40A0A0B4J280 105 aa16.52■□□□□ 0.24
PRDM4-205ENST00000550376 CORTO00230 105 aa16.52■□□□□ 0.24
PRDM4-205ENST00000550376 IGKV1-17P01599 117 aa16.52■□□□□ 0.24
PRDM4-205ENST00000550376 EGR2P11161 476 aaPredicted RBP16.52■□□□□ 0.24
PRDM4-205ENST00000550376 BPIFB3P59826 476 aa16.52■□□□□ 0.24
PRDM4-205ENST00000550376 EBI3Q14213 229 aa16.52■□□□□ 0.24
PRDM4-205ENST00000550376 MAPK1IP1LQ8NDC0 245 aa16.52■□□□□ 0.24
PRDM4-205ENST00000550376 FAM210BQ96KR6 192 aa16.52■□□□□ 0.24
PRDM4-205ENST00000550376 FANCD2OSQ96PS1 177 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms