RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PIGBOS1A0A0B4J2F0 54 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 A0A1B0GWJ7 208 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 IGLL1P15814 213 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 PLGLAQ15195 96 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 OR4B1Q8NGF8 309 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 TNRC6AQ8NDV7 1962 aaKnown RBP11.96□□□□□ -0.49
HOXC11-202ENST00000546378 CENPEQ02224 2701 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 DLL1O00548 723 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 CHEK1O14757 476 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 TMEM136Q6ZRR5 245 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 TCTEX1D1Q8N7M0 179 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 IFI27L2Q9H2X8 130 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 OR2T8A6NH00 312 aa11.96□□□□□ -0.5
HOXC11-202ENST00000546378 K7EMI3 77 aa11.96□□□□□ -0.5
HOXC11-202ENST00000546378 IGLC2P0DOY2 106 aa11.96□□□□□ -0.5
HOXC11-202ENST00000546378 IGLC3P0DOY3 106 aa11.96□□□□□ -0.5
HOXC11-202ENST00000546378 EBLN2Q6P2I7 272 aa11.96□□□□□ -0.5
HOXC11-202ENST00000546378 PRNTQ86SH4 94 aa11.96□□□□□ -0.5
HOXC11-202ENST00000546378 PPP1R35Q8TAP8 253 aa11.96□□□□□ -0.5
HOXC11-202ENST00000546378 PAXXQ9BUH6 204 aa11.96□□□□□ -0.5
HOXC11-202ENST00000546378 M0QZK8 103 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 SAA1P0DJI8 122 aaPredicted RBP11.95□□□□□ -0.5
HOXC11-202ENST00000546378 RIPPLY3P57055 190 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 LYZP61626 148 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 VWC2Q2TAL6 325 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 TPSG1Q9NRR2 321 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 OR4C46A6NHA9 309 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 NDUFB8O95169 186 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 FAM27E3Q08E93 113 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 C1orf159Q96HA4 380 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 ALKBH7Q9BT30 221 aaPredicted RBP11.95□□□□□ -0.5
HOXC11-202ENST00000546378 MRPL20Q9BYC9 149 aaKnown RBP11.95□□□□□ -0.5
HOXC11-202ENST00000546378 IDI2-AS1Q9NZ38 188 aa11.95□□□□□ -0.5
HOXC11-202ENST00000546378 F11RQ9Y624 299 aaKnown RBP11.95□□□□□ -0.5
HOXC11-202ENST00000546378 AMY1AP04745 511 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 TSPOP30536 169 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 VDAC2P45880 294 aaPredicted RBP11.94□□□□□ -0.5
HOXC11-202ENST00000546378 TMEM177Q53S58 311 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 NUP35Q8NFH5 326 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 NUDT10Q8NFP7 164 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 NUDT11Q96G61 164 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 RBP4P02753 201 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 FAM87AP0C7U9 286 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 PSG1P11464 419 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 COMPP49747 757 aaPredicted RBP11.94□□□□□ -0.5
HOXC11-202ENST00000546378 LINC00305Q7Z4B0 112 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 TEX45Q8NA69 505 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 C18orf32Q8TCD1 76 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 TRBV6-6A0A0A6YYG2 114 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 IGHV2OR16-5A0A0B4J2B6 119 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 PPIAL4DF5H284 164 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 COX7A1P24310 79 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 C10orf113Q5VZT2 155 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 OR1L4Q8NGR5 311 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 HES4Q9HCC6 221 aa11.94□□□□□ -0.5
HOXC11-202ENST00000546378 MRPL36Q9P0J6 103 aaKnown RBP11.94□□□□□ -0.5
HOXC11-202ENST00000546378 MRPS18CQ9Y3D5 142 aaKnown RBP11.94□□□□□ -0.5
HOXC11-202ENST00000546378 ADH4P08319 380 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 SFTPCP11686 197 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 TAS2R45P59539 299 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 TNFAIP6P98066 277 aaPredicted RBP11.93□□□□□ -0.5
HOXC11-202ENST00000546378 NIT1Q86X76 327 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 CIARTQ8N365 385 aaPredicted RBP11.93□□□□□ -0.5
HOXC11-202ENST00000546378 ABHD17AQ96GS6 310 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 ZFP30Q9Y2G7 519 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 SSUH2Q9Y2M2 353 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 CSPG4Q6UVK1 2322 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 IQCF6A8MYZ5 107 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 LYNX1G3V0Z9 82 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 LYNX1P0DP58 116 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 GDF5OSQ5U4N7 250 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 SPATA12Q7Z6I5 190 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 FAM90A1Q86YD7 464 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 ZBTB34Q8NCN2 500 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 ZNF738Q8NE65 137 aa11.93□□□□□ -0.5
HOXC11-202ENST00000546378 IGHV1-18A0A0C4DH31 117 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 C15orf61A6NNL5 157 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 HSBP1L1C9JCN9 74 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 C15orf65H3BRN8 121 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 CD99P14209 185 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 YPEL3P61236 119 aaPredicted RBP11.92□□□□□ -0.5
HOXC11-202ENST00000546378 RUSC1-AS1Q66K80 236 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 AMMECR1LQ6DCA0 310 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 DCHS2Q6V1P9 2916 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 MGST3O14880 152 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 C8orf88P0DMB2 117 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 CX3CL1P78423 397 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 SPACA3Q8IXA5 215 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 ZNF503Q96F45 646 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 PROCRQ9UNN8 238 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 IGHV3-23P01764 117 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 HTR1DP28221 377 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 SRSF7Q16629 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
HOXC11-202ENST00000546378 RTL8BQ17RB0 113 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 IGFL4Q6B9Z1 124 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 KLHDC1Q8N7A1 406 aa11.92□□□□□ -0.5
HOXC11-202ENST00000546378 IGHV3OR16-13A0A075B7E8 117 aa11.91□□□□□ -0.5
HOXC11-202ENST00000546378 IGHV3-74A0A0B4J1X5 117 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms