RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SACSQ9NZJ4 4579 aa14.64□□□□□ -0.07
CHD4-213ENST00000545584 IGKV1-17P01599 117 aa14.63□□□□□ -0.07
CHD4-213ENST00000545584 ANXA3P12429 323 aa14.63□□□□□ -0.07
CHD4-213ENST00000545584 AKR1C4P17516 323 aa14.63□□□□□ -0.07
CHD4-213ENST00000545584 FAUP35544 74 aaKnown RBP14.63□□□□□ -0.07
CHD4-213ENST00000545584 P2RY1P47900 373 aa14.63□□□□□ -0.07
CHD4-213ENST00000545584 EIF2B2P49770 351 aaKnown RBP14.63□□□□□ -0.07
CHD4-213ENST00000545584 RND2P52198 227 aa14.63□□□□□ -0.07
CHD4-213ENST00000545584 TMEM187Q14656 261 aa14.63□□□□□ -0.07
CHD4-213ENST00000545584 STXBP6Q8NFX7 210 aa14.63□□□□□ -0.07
CHD4-213ENST00000545584 Q8WTZ3 238 aa14.63□□□□□ -0.07
CHD4-213ENST00000545584 RYR2Q92736 4967 aa14.62□□□□□ -0.07
CHD4-213ENST00000545584 PIGBOS1A0A0B4J2F0 54 aa14.62□□□□□ -0.07
CHD4-213ENST00000545584 NXPH3O95157 252 aa14.62□□□□□ -0.07
CHD4-213ENST00000545584 NPY1RP25929 384 aa14.62□□□□□ -0.07
CHD4-213ENST00000545584 EWSR1Q01844 656 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHD4-213ENST00000545584 LEMD1Q68G75 181 aa14.62□□□□□ -0.07
CHD4-213ENST00000545584 PRSS54Q6PEW0 395 aa14.62□□□□□ -0.07
CHD4-213ENST00000545584 RARRES2Q99969 163 aa14.62□□□□□ -0.07
CHD4-213ENST00000545584 KLK5Q9Y337 293 aaPredicted RBP14.62□□□□□ -0.07
CHD4-213ENST00000545584 A0A0B4J2A0 478 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 CA1P00915 261 aaPredicted RBP14.61□□□□□ -0.07
CHD4-213ENST00000545584 IFNA10P01566 189 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 IGLC1P0CG04 106 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 OR10J1P30954 320 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 CCR6P51684 374 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 YPEL3P61236 119 aaPredicted RBP14.61□□□□□ -0.07
CHD4-213ENST00000545584 SRPXP78539 464 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 CEMP1Q6PRD7 247 aaPredicted RBP14.61□□□□□ -0.07
CHD4-213ENST00000545584 STHQ8IWL8 128 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 LGI3Q8N145 548 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 LYSTQ99698 3801 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 SOSTQ9BQB4 213 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 PRR13Q9NZ81 148 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 SHPKQ9UHJ6 478 aa14.61□□□□□ -0.07
CHD4-213ENST00000545584 SMCO1Q147U7 214 aa14.6□□□□□ -0.07
CHD4-213ENST00000545584 NMSQ5H8A3 153 aa14.6□□□□□ -0.07
CHD4-213ENST00000545584 OR11H2Q8NH07 326 aa14.6□□□□□ -0.07
CHD4-213ENST00000545584 U3KQ87 197 aa14.6□□□□□ -0.07
CHD4-213ENST00000545584 HELTA6NFD8 242 aa14.59□□□□□ -0.07
CHD4-213ENST00000545584 K7EQG2 157 aa14.59□□□□□ -0.07
CHD4-213ENST00000545584 HNRNPCP07910 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
CHD4-213ENST00000545584 AP3S2P59780 193 aa14.59□□□□□ -0.07
CHD4-213ENST00000545584 RBMS2Q15434 407 aaKnown RBP14.59□□□□□ -0.07
CHD4-213ENST00000545584 FAM24BQ8N5W8 94 aa14.59□□□□□ -0.07
CHD4-213ENST00000545584 ACY3Q96HD9 319 aa14.59□□□□□ -0.07
CHD4-213ENST00000545584 AP2S1P53680 142 aaPredicted RBP14.58□□□□□ -0.08
CHD4-213ENST00000545584 PYDC2Q56P42 97 aa14.58□□□□□ -0.08
CHD4-213ENST00000545584 LYZL2Q7Z4W2 148 aa14.58□□□□□ -0.08
CHD4-213ENST00000545584 DTD1Q8TEA8 209 aa14.58□□□□□ -0.08
CHD4-213ENST00000545584 LINC00476Q8WZB0 136 aa14.58□□□□□ -0.08
CHD4-213ENST00000545584 NPIPB3Q92617 1050 aa14.58□□□□□ -0.08
CHD4-213ENST00000545584 HSPB7Q9UBY9 170 aa14.58□□□□□ -0.08
CHD4-213ENST00000545584 CCDC160A6NGH7 325 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 LY6G6CO95867 125 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 IL4P05112 153 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 ZNF688P0C7X2 276 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 S100A5P33763 92 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 SUPT4H1P63272 117 aaKnown RBP14.57□□□□□ -0.08
CHD4-213ENST00000545584 TMED4Q7Z7H5 227 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 TOMM5Q8N4H5 51 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 OR1S1Q8NH92 325 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 TMEM170AQ8WVE7 144 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 RBKSQ9H477 322 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 U3KQE9 123 aa14.57□□□□□ -0.08
CHD4-213ENST00000545584 IFNA4P05014 189 aa14.56□□□□□ -0.08
CHD4-213ENST00000545584 RD3LP0DJH9 198 aa14.56□□□□□ -0.08
CHD4-213ENST00000545584 ATP5IP56385 69 aaPredicted RBP14.56□□□□□ -0.08
CHD4-213ENST00000545584 DHRS2Q13268 280 aa14.56□□□□□ -0.08
CHD4-213ENST00000545584 KLF9Q13886 244 aaPredicted RBP14.56□□□□□ -0.08
CHD4-213ENST00000545584 TMEM41BQ5BJD5 291 aa14.56□□□□□ -0.08
CHD4-213ENST00000545584 C16orf54Q6UWD8 224 aa14.56□□□□□ -0.08
CHD4-213ENST00000545584 MFFQ9GZY8 342 aa14.56□□□□□ -0.08
CHD4-213ENST00000545584 DUXBA0A1W2PPF3 345 aa14.55□□□□□ -0.08
CHD4-213ENST00000545584 TOMM40O96008 361 aa14.55□□□□□ -0.08
CHD4-213ENST00000545584 TMEM128Q5BJH2 165 aa14.55□□□□□ -0.08
CHD4-213ENST00000545584 MORN3Q6PF18 240 aaPredicted RBP14.55□□□□□ -0.08
CHD4-213ENST00000545584 C11orf45Q8TAV5 145 aa14.55□□□□□ -0.08
CHD4-213ENST00000545584 DCANP1Q8TF63 244 aa14.55□□□□□ -0.08
CHD4-213ENST00000545584 PHLDA1Q8WV24 401 aaPredicted RBP14.55□□□□□ -0.08
CHD4-213ENST00000545584 GLMPQ8WWB7 406 aa14.55□□□□□ -0.08
CHD4-213ENST00000545584 C11orf68Q9H3H3 251 aaKnown RBP14.55□□□□□ -0.08
CHD4-213ENST00000545584 DNAH1Q9P2D7 4330 aa14.55□□□□□ -0.08
CHD4-213ENST00000545584 SPP1P10451 314 aa14.54□□□□□ -0.08
CHD4-213ENST00000545584 USF2Q15853 346 aaPredicted RBP14.54□□□□□ -0.08
CHD4-213ENST00000545584 TRPT1Q86TN4 253 aaKnown RBP14.54□□□□□ -0.08
CHD4-213ENST00000545584 TRIM63Q969Q1 353 aa14.54□□□□□ -0.08
CHD4-213ENST00000545584 PFDN2Q9UHV9 154 aa14.54□□□□□ -0.08
CHD4-213ENST00000545584 PSG1P11464 419 aa14.53□□□□□ -0.08
CHD4-213ENST00000545584 VAMP1P23763 118 aa14.53□□□□□ -0.08
CHD4-213ENST00000545584 ACTL10Q5JWF8 245 aa14.53□□□□□ -0.08
CHD4-213ENST00000545584 DEDD2Q8WXF8 326 aa14.53□□□□□ -0.08
CHD4-213ENST00000545584 SLC35E1Q96K37 410 aa14.53□□□□□ -0.08
CHD4-213ENST00000545584 SLC25A21Q9BQT8 299 aaPredicted RBP14.53□□□□□ -0.08
CHD4-213ENST00000545584 ZFP92A6NM28 416 aa14.52□□□□□ -0.09
CHD4-213ENST00000545584 KNCNA6PVL3 124 aa14.52□□□□□ -0.09
CHD4-213ENST00000545584 GPX4P36969 197 aaPredicted RBP14.52□□□□□ -0.09
CHD4-213ENST00000545584 NUP62P37198 522 aaPredicted RBP14.52□□□□□ -0.09
CHD4-213ENST00000545584 SNRPD3P62318 126 aaKnown RBP14.52□□□□□ -0.09
CHD4-213ENST00000545584 OR51G1Q8NGK1 321 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms