RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 RBKSQ9H477 322 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 TMEM231Q9H6L2 316 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 UBQLN2Q9UHD9 624 aa10.33□□□□□ -0.76
VAMP1-208ENST00000544432 FAM90A26D6RGX4 464 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 IFNA10P01566 189 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
VAMP1-208ENST00000544432 VAMP1P23763 118 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 RND2P52198 227 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 APOC4P55056 127 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 BAK1Q16611 211 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 TIGITQ495A1 244 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 TRIQKQ629K1 86 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 Q6ZWC4 215 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 TCF24Q7RTU0 167 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 CENPSQ8N2Z9 138 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 OR1S1Q8NH92 325 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 IL17DQ8TAD2 202 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 METTL26Q96S19 204 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 OVOL2Q9BRP0 275 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 TP53TG1Q9Y2A0 90 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 TMED3Q9Y3Q3 217 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 DYNC2H1Q8NCM8 4307 aaKnown RBP10.32□□□□□ -0.76
VAMP1-208ENST00000544432 CSMD3Q7Z407 3707 aa10.32□□□□□ -0.76
VAMP1-208ENST00000544432 IGHV3OR16-13A0A075B7E8 117 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 IGHV3-74A0A0B4J1X5 117 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 NXPH3O95157 252 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 OR10J1P30954 320 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 GPX4P36969 197 aaPredicted RBP10.31□□□□□ -0.76
VAMP1-208ENST00000544432 INPP1P49441 399 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 PPP1R1AQ13522 171 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 WFDC3Q8IUB2 231 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 LILRB2Q8N423 598 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 Q8WTZ3 238 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 NARS2Q96I59 477 aaKnown RBP10.31□□□□□ -0.76
VAMP1-208ENST00000544432 SDHCQ99643 169 aaPredicted RBP10.31□□□□□ -0.76
VAMP1-208ENST00000544432 U3KQE9 123 aa10.31□□□□□ -0.76
VAMP1-208ENST00000544432 MED6O75586 246 aa10.3□□□□□ -0.76
VAMP1-208ENST00000544432 DFFBO76075 338 aa10.3□□□□□ -0.76
VAMP1-208ENST00000544432 NDUFB6O95139 128 aa10.3□□□□□ -0.76
VAMP1-208ENST00000544432 C7orf50Q9BRJ6 194 aaKnown RBP10.3□□□□□ -0.76
VAMP1-208ENST00000544432 MS4A6AQ9H2W1 248 aa10.3□□□□□ -0.76
VAMP1-208ENST00000544432 CENPXA8MT69 81 aa10.29□□□□□ -0.76
VAMP1-208ENST00000544432 DNASE2O00115 360 aaPredicted RBP10.29□□□□□ -0.76
VAMP1-208ENST00000544432 CNPY1Q3B7I2 92 aa10.29□□□□□ -0.76
VAMP1-208ENST00000544432 CIB3Q96Q77 187 aaPredicted RBP10.29□□□□□ -0.76
VAMP1-208ENST00000544432 MAP6D1Q9H9H5 199 aa10.29□□□□□ -0.76
VAMP1-208ENST00000544432 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
VAMP1-208ENST00000544432 IGKV3-7A0A075B6H7 116 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 IGHV3-66A0A0C4DH42 116 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 C9orf170A2RU37 121 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 TOMM40O96008 361 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 IFNA4P05014 189 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 RD3LP0DJH9 198 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 P2RY1P47900 373 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 TFPI2P48307 235 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 APRG1Q8IVJ8 170 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 GBGT1Q8N5D6 347 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 STPG3Q8N7X2 389 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 ACY3Q96HD9 319 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 GRAMD2BQ96HH9 432 aa10.28□□□□□ -0.76
VAMP1-208ENST00000544432 RYR3Q15413 4870 aa10.27□□□□□ -0.76
VAMP1-208ENST00000544432 SPRY2O43597 315 aa10.27□□□□□ -0.77
VAMP1-208ENST00000544432 HNRNPCP07910 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
VAMP1-208ENST00000544432 HOXB5P09067 269 aa10.27□□□□□ -0.77
VAMP1-208ENST00000544432 IL7P13232 177 aa10.27□□□□□ -0.77
VAMP1-208ENST00000544432 BTCP35070 178 aa10.27□□□□□ -0.77
VAMP1-208ENST00000544432 EIF2B2P49770 351 aaKnown RBP10.27□□□□□ -0.77
VAMP1-208ENST00000544432 AP2S1P53680 142 aaPredicted RBP10.27□□□□□ -0.77
VAMP1-208ENST00000544432 RAB11AP62491 216 aa10.27□□□□□ -0.77
VAMP1-208ENST00000544432 RPL11P62913 178 aaKnown RBP10.27□□□□□ -0.77
VAMP1-208ENST00000544432 RPP30P78346 268 aaKnown RBP10.27□□□□□ -0.77
VAMP1-208ENST00000544432 GAMTQ14353 236 aa10.27□□□□□ -0.77
VAMP1-208ENST00000544432 GGNBP1Q5YKI7 109 aa10.27□□□□□ -0.77
VAMP1-208ENST00000544432 RNF183Q96D59 192 aa10.27□□□□□ -0.77
VAMP1-208ENST00000544432 STARD9Q9P2P6 4700 aa10.27□□□□□ -0.77
VAMP1-208ENST00000544432 HELTA6NFD8 242 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 K7EQG2 157 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 SYNGR2O43760 224 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 PSG1P11464 419 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 RPL35AP18077 110 aaKnown RBP10.26□□□□□ -0.77
VAMP1-208ENST00000544432 DHRS2Q13268 280 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 ZFAND6Q6FIF0 208 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 C16orf54Q6UWD8 224 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 LINC00299Q6ZSB3 139 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 COQ8AQ8NI60 647 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 SLC35E1Q96K37 410 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 FLVCR2Q9UPI3 526 aa10.26□□□□□ -0.77
VAMP1-208ENST00000544432 SACSQ9NZJ4 4579 aa10.25□□□□□ -0.77
VAMP1-208ENST00000544432 IL4P05112 153 aa10.25□□□□□ -0.77
VAMP1-208ENST00000544432 FABP1P07148 127 aa10.25□□□□□ -0.77
VAMP1-208ENST00000544432 OR4E1P0C645 316 aa10.25□□□□□ -0.77
VAMP1-208ENST00000544432 ATF4P18848 351 aaPredicted RBP10.25□□□□□ -0.77
VAMP1-208ENST00000544432 NUP62P37198 522 aaPredicted RBP10.25□□□□□ -0.77
VAMP1-208ENST00000544432 DEFB131AP59861 70 aa10.25□□□□□ -0.77
VAMP1-208ENST00000544432 ID3Q02535 119 aa10.25□□□□□ -0.77
VAMP1-208ENST00000544432 USF2Q15853 346 aaPredicted RBP10.25□□□□□ -0.77
VAMP1-208ENST00000544432 ZNF124Q15973 351 aa10.25□□□□□ -0.77
VAMP1-208ENST00000544432 LYG2Q86SG7 212 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms