RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	LGALS4	P56470	323 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	RAB11A	P62491	216 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	VAMP2	P63027	116 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	SERF2	P84101	59 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	COTL1	Q14019	142 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	EDDM3A	Q14507	147 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	HLA-DRB5	Q30154	266 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	C4orf48	Q5BLP8	95 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	PRAMEF5	Q5TYX0	476 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	TEX38	Q6PEX7	206 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	TEX43	Q6ZNM6	134 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	TMEM219	Q86XT9	240 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	NDUFA11	Q86Y39	141 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	MAPKAPK5-AS1	Q8N8E1	139 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	OR5C1	Q8NGR4	320 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	PINX1	Q96BK5	328 aa	Known RBP	5.06	□□□□□ -1.6
CIT-213	ENST00000543324	OR5B12	Q96R08	314 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	GAL3ST2	Q9H3Q3	398 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	ZNF286A	Q9HBT8	521 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	FKBP11	Q9NYL4	201 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	NAGK	Q9UJ70	344 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	TIMM9	Q9Y5J7	89 aa		5.06	□□□□□ -1.6
CIT-213	ENST00000543324	TRAV9-1	A0A075B6T8	112 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	TRGV10	A0A0A0MS01	117 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	C3orf85	A0A1B0GTC6	90 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	KBTBD11-OT1	A0A1B0GTJ5	212 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324		A0A1B0GV50	99 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	MAP1LC3B2	A6NCE7	125 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	OOSP1	A8MZH6	123 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	BUB1B-PAK6	H3BSN5	160 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324		H7BYZ3	331 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	SIRPB1	O00241	398 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	NPS	P0C0P6	89 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	RBMY1C	P0DJD4	496 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	CD28	P10747	220 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	HTR1D	P28221	377 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	BRS3	P32247	399 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	CNN1	P51911	297 aa	Known RBP	5.05	□□□□□ -1.6
CIT-213	ENST00000543324	RPL23	P62829	140 aa	Known RBP	5.05	□□□□□ -1.6
CIT-213	ENST00000543324	BLCAP	P62952	87 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	PAFAH1B2	P68402	229 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	AES	Q08117	197 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	BSX	Q3C1V8	233 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	TMEM95	Q3KNT9	176 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	NMS	Q5H8A3	153 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	ZNF66	Q6ZN08	573 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	THNSL2	Q86YJ6	484 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	MRPL41	Q8IXM3	137 aa	Known RBP	5.05	□□□□□ -1.6
CIT-213	ENST00000543324	SELENOH	Q8IZQ5	122 aa	Known RBP	5.05	□□□□□ -1.6
CIT-213	ENST00000543324	ABHD12	Q8N2K0	398 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	OR5D18	Q8NGL1	313 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	PLPPR1	Q8TBJ4	325 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	ZNF596	Q8TC21	504 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	MIEN1	Q9BRT3	115 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	ATG101	Q9BSB4	218 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	PRSS22	Q9GZN4	317 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	MAP1LC3B	Q9GZQ8	125 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	PLEKHJ1	Q9NW61	149 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	ZNF581	Q9P0T4	197 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	DPM3	Q9P2X0	92 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	GAB2	Q9UQC2	676 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	ZFP30	Q9Y2G7	519 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324	HILPDA	Q9Y5L2	63 aa		5.05	□□□□□ -1.6
CIT-213	ENST00000543324		A0A1W2PPI3	338 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	F2RL2	O00254	374 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	MPPED1	O15442	326 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	YPEL1	O60688	119 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	IFNA5	P01569	189 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	GZMH	P20718	246 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	VDAC1	P21796	283 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	GALR1	P47211	349 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	CEBPG	P53567	150 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	PAX9	P55771	341 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	RBM11	P57052	281 aa	Known RBP	5.04	□□□□□ -1.6
CIT-213	ENST00000543324	HERV-K104	P61576	105 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	SP6	Q3SY56	376 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	TMEM41B	Q5BJD5	291 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	TPTE2P1	Q5T6R2	138 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	KCNIP4	Q6PIL6	250 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	C6orf201	Q7Z4U5	140 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	TMEM144	Q7Z5S9	345 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	SBSPON	Q8IVN8	264 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	GAPT	Q8N292	157 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	C8orf31	Q8N9H6	132 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	OR13A1	Q8NGR1	328 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	OR2T10	Q8NGZ9	312 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	DPF1	Q92782	380 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	YPEL2	Q96QA6	119 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	RAB40C	Q96S21	281 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	TP53RK	Q96S44	253 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	CITED2	Q99967	270 aa	Predicted RBP	5.04	□□□□□ -1.6
CIT-213	ENST00000543324	FAAP24	Q9BTP7	215 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	RBKS	Q9H477	322 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	MANBAL	Q9NQG1	85 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	RPRM	Q9NS64	109 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	CALY	Q9NYX4	217 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	GNG13	Q9P2W3	67 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	FUT9	Q9Y231	359 aa		5.04	□□□□□ -1.6
CIT-213	ENST00000543324	TRAV39	A0A0B4J263	110 aa		5.03	□□□□□ -1.6
CIT-213	ENST00000543324		A0A1W2PN81	502 aa		5.03	□□□□□ -1.6

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