RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 Q8WTZ3 238 aa14.93□□□□□ -0.02
DDB1-220ENST00000542337 GATAD1Q8WUU5 269 aa14.93□□□□□ -0.02
DDB1-220ENST00000542337 MRPL36Q9P0J6 103 aaKnown RBP14.93□□□□□ -0.02
DDB1-220ENST00000542337 NUPR2A6NF83 97 aa14.92□□□□□ -0.02
DDB1-220ENST00000542337 ATF4P18848 351 aaPredicted RBP14.92□□□□□ -0.02
DDB1-220ENST00000542337 CRYBB3P26998 211 aa14.92□□□□□ -0.02
DDB1-220ENST00000542337 AP3S2P59780 193 aa14.92□□□□□ -0.02
DDB1-220ENST00000542337 SRPXP78539 464 aa14.92□□□□□ -0.02
DDB1-220ENST00000542337 TMEM187Q14656 261 aa14.92□□□□□ -0.02
DDB1-220ENST00000542337 TIGITQ495A1 244 aa14.92□□□□□ -0.02
DDB1-220ENST00000542337 LILRB2Q8N423 598 aa14.92□□□□□ -0.02
DDB1-220ENST00000542337 NPY1RP25929 384 aa14.91□□□□□ -0.02
DDB1-220ENST00000542337 CCR6P51684 374 aa14.91□□□□□ -0.02
DDB1-220ENST00000542337 RND2P52198 227 aa14.91□□□□□ -0.02
DDB1-220ENST00000542337 DEFB131AP59861 70 aa14.91□□□□□ -0.02
DDB1-220ENST00000542337 PRSS54Q6PEW0 395 aa14.91□□□□□ -0.02
DDB1-220ENST00000542337 STXBP6Q8NFX7 210 aa14.91□□□□□ -0.02
DDB1-220ENST00000542337 SOSTQ9BQB4 213 aa14.91□□□□□ -0.02
DDB1-220ENST00000542337 A0A0B4J2A0 478 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 NXPH3O95157 252 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 IFNA10P01566 189 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 IGKV1-17P01599 117 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 OR10J1P30954 320 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 P2RY1P47900 373 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 PYDC2Q56P42 97 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 NMSQ5H8A3 153 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 STHQ8IWL8 128 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 LGI3Q8N145 548 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 RARRES2Q99969 163 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 SHPKQ9UHJ6 478 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 U3KQ87 197 aa14.9□□□□□ -0.02
DDB1-220ENST00000542337 CCDC160A6NGH7 325 aa14.89□□□□□ -0.03
DDB1-220ENST00000542337 YPEL3P61236 119 aaPredicted RBP14.89□□□□□ -0.03
DDB1-220ENST00000542337 SMCO1Q147U7 214 aa14.89□□□□□ -0.03
DDB1-220ENST00000542337 LEMD1Q68G75 181 aa14.89□□□□□ -0.03
DDB1-220ENST00000542337 KLK5Q9Y337 293 aaPredicted RBP14.89□□□□□ -0.03
DDB1-220ENST00000542337 HELTA6NFD8 242 aa14.88□□□□□ -0.03
DDB1-220ENST00000542337 CA1P00915 261 aaPredicted RBP14.88□□□□□ -0.03
DDB1-220ENST00000542337 HNRNPCP07910 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
DDB1-220ENST00000542337 IGLC1P0CG04 106 aa14.88□□□□□ -0.03
DDB1-220ENST00000542337 S100A5P33763 92 aa14.88□□□□□ -0.03
DDB1-220ENST00000542337 AP2S1P53680 142 aaPredicted RBP14.88□□□□□ -0.03
DDB1-220ENST00000542337 CEMP1Q6PRD7 247 aaPredicted RBP14.88□□□□□ -0.03
DDB1-220ENST00000542337 TOMM5Q8N4H5 51 aa14.88□□□□□ -0.03
DDB1-220ENST00000542337 PRR13Q9NZ81 148 aa14.88□□□□□ -0.03
DDB1-220ENST00000542337 ATP5IP56385 69 aaPredicted RBP14.87□□□□□ -0.03
DDB1-220ENST00000542337 LYZL2Q7Z4W2 148 aa14.87□□□□□ -0.03
DDB1-220ENST00000542337 OR11H2Q8NH07 326 aa14.87□□□□□ -0.03
DDB1-220ENST00000542337 OR1S1Q8NH92 325 aa14.87□□□□□ -0.03
DDB1-220ENST00000542337 DTD1Q8TEA8 209 aa14.87□□□□□ -0.03
DDB1-220ENST00000542337 NPIPB3Q92617 1050 aa14.87□□□□□ -0.03
DDB1-220ENST00000542337 ACY3Q96HD9 319 aa14.87□□□□□ -0.03
DDB1-220ENST00000542337 HSPB7Q9UBY9 170 aa14.87□□□□□ -0.03
DDB1-220ENST00000542337 DNAH1Q9P2D7 4330 aa14.87□□□□□ -0.03
DDB1-220ENST00000542337 K7EQG2 157 aa14.86□□□□□ -0.03
DDB1-220ENST00000542337 IFNA4P05014 189 aa14.86□□□□□ -0.03
DDB1-220ENST00000542337 RD3LP0DJH9 198 aa14.86□□□□□ -0.03
DDB1-220ENST00000542337 EWSR1Q01844 656 aaKnown RBP eCLIP14.86□□□□□ -0.031e-6■□□□□ 10.3
DDB1-220ENST00000542337 RBMS2Q15434 407 aaKnown RBP14.86□□□□□ -0.03
DDB1-220ENST00000542337 TMED4Q7Z7H5 227 aa14.86□□□□□ -0.03
DDB1-220ENST00000542337 RBKSQ9H477 322 aa14.86□□□□□ -0.03
DDB1-220ENST00000542337 PFDN2Q9UHV9 154 aa14.86□□□□□ -0.03
DDB1-220ENST00000542337 IL4P05112 153 aa14.85□□□□□ -0.03
DDB1-220ENST00000542337 SUPT4H1P63272 117 aaKnown RBP14.85□□□□□ -0.03
DDB1-220ENST00000542337 KLF9Q13886 244 aaPredicted RBP14.85□□□□□ -0.03
DDB1-220ENST00000542337 FAM24BQ8N5W8 94 aa14.85□□□□□ -0.03
DDB1-220ENST00000542337 DUXBA0A1W2PPF3 345 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 TOMM40O96008 361 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 ZNF688P0C7X2 276 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 DHRS2Q13268 280 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 TMEM41BQ5BJD5 291 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 TMEM128Q5BJH2 165 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 TMEM170AQ8WVE7 144 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 DEDD2Q8WXF8 326 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 SLC25A21Q9BQT8 299 aaPredicted RBP14.84□□□□□ -0.03
DDB1-220ENST00000542337 MFFQ9GZY8 342 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 U3KQE9 123 aa14.84□□□□□ -0.03
DDB1-220ENST00000542337 LY6G6CO95867 125 aa14.83□□□□□ -0.04
DDB1-220ENST00000542337 GPX4P36969 197 aaPredicted RBP14.83□□□□□ -0.04
DDB1-220ENST00000542337 MORN3Q6PF18 240 aaPredicted RBP14.83□□□□□ -0.04
DDB1-220ENST00000542337 C16orf54Q6UWD8 224 aa14.83□□□□□ -0.04
DDB1-220ENST00000542337 FABP1P07148 127 aa14.82□□□□□ -0.04
DDB1-220ENST00000542337 SPP1P10451 314 aa14.82□□□□□ -0.04
DDB1-220ENST00000542337 VAMP1P23763 118 aa14.82□□□□□ -0.04
DDB1-220ENST00000542337 NUP62P37198 522 aaPredicted RBP14.82□□□□□ -0.04
DDB1-220ENST00000542337 C11orf45Q8TAV5 145 aa14.82□□□□□ -0.04
DDB1-220ENST00000542337 DCANP1Q8TF63 244 aa14.82□□□□□ -0.04
DDB1-220ENST00000542337 LINC00476Q8WZB0 136 aa14.82□□□□□ -0.04
DDB1-220ENST00000542337 TRIM63Q969Q1 353 aa14.82□□□□□ -0.04
DDB1-220ENST00000542337 SLC35E1Q96K37 410 aa14.82□□□□□ -0.04
DDB1-220ENST00000542337 C11orf68Q9H3H3 251 aaKnown RBP14.82□□□□□ -0.04
DDB1-220ENST00000542337 ZFP92A6NM28 416 aa14.81□□□□□ -0.04
DDB1-220ENST00000542337 MED6O75586 246 aa14.81□□□□□ -0.04
DDB1-220ENST00000542337 PSG1P11464 419 aa14.81□□□□□ -0.04
DDB1-220ENST00000542337 SNRPD3P62318 126 aaKnown RBP14.81□□□□□ -0.04
DDB1-220ENST00000542337 RAB11AP62491 216 aa14.81□□□□□ -0.04
DDB1-220ENST00000542337 OR51G1Q8NGK1 321 aa14.81□□□□□ -0.04
DDB1-220ENST00000542337 PHLDA1Q8WV24 401 aaPredicted RBP14.81□□□□□ -0.04
DDB1-220ENST00000542337 GLMPQ8WWB7 406 aa14.81□□□□□ -0.04
DDB1-220ENST00000542337 RPP30P78346 268 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms