RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	NPPC	P23582	126 aa		14.8	□□□□□ -0.04
RAP1B-222	ENST00000540781	GBGT1	Q8N5D6	347 aa		14.8	□□□□□ -0.04
RAP1B-222	ENST00000540781	OR1S2	Q8NGQ3	325 aa		14.8	□□□□□ -0.04
RAP1B-222	ENST00000540781	SDHC	Q99643	169 aa	Predicted RBP	14.8	□□□□□ -0.04
RAP1B-222	ENST00000540781	IGLC1	P0CG04	106 aa		14.79	□□□□□ -0.04
RAP1B-222	ENST00000540781	CMC4	P56277	68 aa	Predicted RBP	14.79	□□□□□ -0.04
RAP1B-222	ENST00000540781	CASC10	Q5T4H9	136 aa		14.79	□□□□□ -0.04
RAP1B-222	ENST00000540781	LILRB2	Q8N423	598 aa		14.79	□□□□□ -0.04
RAP1B-222	ENST00000540781	METTL26	Q96S19	204 aa		14.79	□□□□□ -0.04
RAP1B-222	ENST00000540781	TMEM231	Q9H6L2	316 aa		14.79	□□□□□ -0.04
RAP1B-222	ENST00000540781		A0A1W2PS18	150 aa		14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	PITX3	O75364	302 aa		14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	DFFB	O76075	338 aa		14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	NDUFB6	O95139	128 aa		14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	SLC25A6	P12236	298 aa		14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	OR10J1	P30954	320 aa		14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	UBE2M	P61081	183 aa	Known RBP	14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	PAFAH1B2	P68402	229 aa		14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	ACY3	Q96HD9	319 aa		14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	TMED3	Q9Y3Q3	217 aa		14.78	□□□□□ -0.04
RAP1B-222	ENST00000540781	CENPX	A8MT69	81 aa		14.77	□□□□□ -0.05
RAP1B-222	ENST00000540781	IFNA4	P05014	189 aa		14.77	□□□□□ -0.05
RAP1B-222	ENST00000540781	HOXB5	P09067	269 aa		14.77	□□□□□ -0.05
RAP1B-222	ENST00000540781	ATP5I	P56385	69 aa	Predicted RBP	14.77	□□□□□ -0.05
RAP1B-222	ENST00000540781	YPEL3	P61236	119 aa	Predicted RBP	14.77	□□□□□ -0.05
RAP1B-222	ENST00000540781	WFDC3	Q8IUB2	231 aa		14.77	□□□□□ -0.05
RAP1B-222	ENST00000540781		Q8WTZ3	238 aa		14.77	□□□□□ -0.05
RAP1B-222	ENST00000540781	NPIPB3	Q92617	1050 aa		14.77	□□□□□ -0.05
RAP1B-222	ENST00000540781	NARS2	Q96I59	477 aa	Known RBP	14.77	□□□□□ -0.05
RAP1B-222	ENST00000540781	KMT2C	Q8NEZ4	4911 aa	Known RBP	14.76	□□□□□ -0.05
RAP1B-222	ENST00000540781	DNASE2	O00115	360 aa	Predicted RBP	14.76	□□□□□ -0.05
RAP1B-222	ENST00000540781	CRYBB3	P26998	211 aa		14.76	□□□□□ -0.05
RAP1B-222	ENST00000540781	APOC4	P55056	127 aa		14.76	□□□□□ -0.05
RAP1B-222	ENST00000540781	RPL11	P62913	178 aa	Known RBP	14.76	□□□□□ -0.05
RAP1B-222	ENST00000540781	ZFAND6	Q6FIF0	208 aa		14.76	□□□□□ -0.05
RAP1B-222	ENST00000540781	APRG1	Q8IVJ8	170 aa		14.76	□□□□□ -0.05
RAP1B-222	ENST00000540781	FLVCR2	Q9UPI3	526 aa		14.76	□□□□□ -0.05
RAP1B-222	ENST00000540781	C9orf170	A2RU37	121 aa		14.75	□□□□□ -0.05
RAP1B-222	ENST00000540781	FAM90A26	D6RGX4	464 aa		14.75	□□□□□ -0.05
RAP1B-222	ENST00000540781	IAPP	P10997	89 aa		14.75	□□□□□ -0.05
RAP1B-222	ENST00000540781	IL7	P13232	177 aa		14.75	□□□□□ -0.05
RAP1B-222	ENST00000540781	RPL35A	P18077	110 aa	Known RBP	14.75	□□□□□ -0.05
RAP1B-222	ENST00000540781	GGNBP1	Q5YKI7	109 aa		14.75	□□□□□ -0.05
RAP1B-222	ENST00000540781	C7orf50	Q9BRJ6	194 aa	Known RBP	14.75	□□□□□ -0.05
RAP1B-222	ENST00000540781	MS4A6A	Q9H2W1	248 aa		14.75	□□□□□ -0.05
RAP1B-222	ENST00000540781	MAP6D1	Q9H9H5	199 aa		14.75	□□□□□ -0.05
RAP1B-222	ENST00000540781	DNAH7	Q8WXX0	4024 aa		14.74	□□□□□ -0.05
RAP1B-222	ENST00000540781	MED6	O75586	246 aa		14.74	□□□□□ -0.05
RAP1B-222	ENST00000540781	P2RY1	P47900	373 aa		14.74	□□□□□ -0.05
RAP1B-222	ENST00000540781	GRAMD2B	Q96HH9	432 aa		14.74	□□□□□ -0.05
RAP1B-222	ENST00000540781	OVOL2	Q9BRP0	275 aa		14.74	□□□□□ -0.05
RAP1B-222	ENST00000540781	TRAV2	A0A0B4J234	112 aa		14.73	□□□□□ -0.05
RAP1B-222	ENST00000540781	UBE2C	O00762	179 aa		14.73	□□□□□ -0.05
RAP1B-222	ENST00000540781	GPX4	P36969	197 aa	Predicted RBP	14.73	□□□□□ -0.05
RAP1B-222	ENST00000540781	ZNF124	Q15973	351 aa		14.73	□□□□□ -0.05
RAP1B-222	ENST00000540781	STPG3	Q8N7X2	389 aa		14.73	□□□□□ -0.05
RAP1B-222	ENST00000540781	SLC35E1	Q96K37	410 aa		14.73	□□□□□ -0.05
RAP1B-222	ENST00000540781	MAGT1	Q9H0U3	335 aa		14.73	□□□□□ -0.05
RAP1B-222	ENST00000540781	RABAC1	Q9UI14	185 aa		14.73	□□□□□ -0.05
RAP1B-222	ENST00000540781	PAIP2B	Q9ULR5	123 aa	Known RBP	14.73	□□□□□ -0.05
RAP1B-222	ENST00000540781	KIR2DL5B	A0A0G2JN68	375 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	KIR2DL5B	A0A0G2JPC4	375 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	TOMM40	O96008	361 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	IL4	P05112	153 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	HNRNPC	P07910	306 aa	Known RBP eCLIP	14.72	□□□□□ -0.05	4e-7	■■■□□ 17
RAP1B-222	ENST00000540781	RD3L	P0DJH9	198 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	BTC	P35070	178 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	RAB11A	P62491	216 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781		Q6ZWC4	215 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	KIR2DL5A	Q8N109	375 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	STXBP6	Q8NFX7	210 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	KIR2DL5B	Q8NHK3	375 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	COQ8A	Q8NI60	647 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	CIB3	Q96Q77	187 aa	Predicted RBP	14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781		U3KQE9	123 aa		14.72	□□□□□ -0.05
RAP1B-222	ENST00000540781	SYNGR2	O43760	224 aa		14.71	□□□□□ -0.05
RAP1B-222	ENST00000540781	ADAP1	O75689	374 aa		14.71	□□□□□ -0.05
RAP1B-222	ENST00000540781	OR4E1	P0C645	316 aa		14.71	□□□□□ -0.05
RAP1B-222	ENST00000540781	GAMT	Q14353	236 aa		14.71	□□□□□ -0.05
RAP1B-222	ENST00000540781	USF2	Q15853	346 aa	Predicted RBP	14.71	□□□□□ -0.05
RAP1B-222	ENST00000540781	LYG2	Q86SG7	212 aa		14.71	□□□□□ -0.05
RAP1B-222	ENST00000540781	ZFP92	A6NM28	416 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	WRB	O00258	174 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	SPRY2	O43597	315 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	PSG1	P11464	419 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	ANXA7	P20073	488 aa	Known RBP	14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	DEFB131A	P59861	70 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	RPP30	P78346	268 aa	Known RBP	14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	DHRS2	Q13268	280 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	DEFB135	Q30KP9	77 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	CNPY1	Q3B7I2	92 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	C4orf46	Q504U0	113 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	IL17D	Q8TAD2	202 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	TP53TG1	Q9Y2A0	90 aa		14.7	□□□□□ -0.06
RAP1B-222	ENST00000540781	PLA2G10	O15496	165 aa		14.69	□□□□□ -0.06
RAP1B-222	ENST00000540781	IFNA21	P01568	189 aa		14.69	□□□□□ -0.06
RAP1B-222	ENST00000540781	EIF2B2	P49770	351 aa	Known RBP	14.69	□□□□□ -0.06
RAP1B-222	ENST00000540781	C16orf54	Q6UWD8	224 aa		14.69	□□□□□ -0.06
RAP1B-222	ENST00000540781	FAM24B	Q8N5W8	94 aa		14.69	□□□□□ -0.06
RAP1B-222	ENST00000540781	OR51G1	Q8NGK1	321 aa		14.69	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms