RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 RND2P52198 227 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 OR8G2PQ6IF36 304 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 ETFRF1Q6IPR1 90 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 C18orf65Q6ZTR6 163 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 ATP5SQ99766 215 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 MFFQ9GZY8 342 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 WNK1Q9H4A3 2382 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 A0A0D9SG52 128 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 TGOLN2O43493 480 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 BCL2L11O43521 198 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 EIF2B2P49770 351 aaKnown RBP8.11□□□□□ -1.11
VPS33A-204ENST00000540669 MFAP4P55083 255 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 ATP5G2Q06055 141 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 OPCMLQ14982 345 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 SPSB3Q6PJ21 355 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 NDUFA11Q86Y39 141 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 TMEM217Q8N7C4 229 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 UBAC2Q8NBM4 344 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 OR1S2Q8NGQ3 325 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 EEF1AKMT3Q96AZ1 226 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 SLC35E1Q96K37 410 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 TRGV9Q99603 122 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 CHRDL1Q9BU40 450 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 WDR61Q9GZS3 305 aaKnown RBP8.11□□□□□ -1.11
VPS33A-204ENST00000540669 UQCC1Q9NVA1 299 aa8.11□□□□□ -1.11
VPS33A-204ENST00000540669 TSSC4Q9Y5U2 329 aaPredicted RBP8.11□□□□□ -1.11
VPS33A-204ENST00000540669 PFDN1O60925 122 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 MPDU1O75352 247 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 IGHV3-48P01763 117 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 NPBWR1P48145 328 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 YPEL3P61236 119 aaPredicted RBP8.1□□□□□ -1.11
VPS33A-204ENST00000540669 INO80EQ8NBZ0 244 aaPredicted RBP8.1□□□□□ -1.11
VPS33A-204ENST00000540669 STOML3Q8TAV4 291 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 NPIPB3Q92617 1050 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 MGST2Q99735 147 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 GGTLC1Q9BX51 225 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 NPVFQ9HCQ7 196 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 GAR1Q9NY12 217 aaKnown RBP8.1□□□□□ -1.11
VPS33A-204ENST00000540669 S4R3C0 116 aa8.1□□□□□ -1.11
VPS33A-204ENST00000540669 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 IGHV3-21A0A0B4J1V1 117 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 UBE2L5PA0A1B0GUS4 154 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 TCRBV4S1A1TA0A5B7 111 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 A8MWP6 167 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 TAAR5O14804 337 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 DFFBO76075 338 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 OR2C1O95371 312 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 IGHV3-11P01762 117 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 GPR183P32249 361 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 PLP1P60201 277 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 CLINT1Q14677 625 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 KHDC1LQ5JSQ8 128 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 HIST2H2BDQ6DRA6 164 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 TMUB2Q71RG4 321 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 OR2G3Q8NGZ4 309 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 RAX2Q96IS3 184 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 ZNF355PQ9NSJ1 428 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 SLC45A2Q9UMX9 530 aa8.09□□□□□ -1.11
VPS33A-204ENST00000540669 IGHV4OR15-8A0A075B7B6 117 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 TRAV30A0A087WSZ9 112 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 A0A087WW49 117 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 TOMM40O96008 361 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 OR10J1P30954 320 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 NKX2-5P52952 324 aaPredicted RBP8.08□□□□□ -1.12
VPS33A-204ENST00000540669 ZNF266Q14584 549 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 RPL7L1Q6DKI1 246 aaKnown RBP8.08□□□□□ -1.12
VPS33A-204ENST00000540669 ACSM6Q6P461 480 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 TEPPQ6URK8 271 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 CLEC19AQ6UXS0 136 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 TMEM182Q6ZP80 229 aaPredicted RBP8.08□□□□□ -1.12
VPS33A-204ENST00000540669 REC114Q7Z4M0 266 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 LILRB2Q8N423 598 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 KLHL30-AS1Q8NEE0 82 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 TMEM190Q8WZ59 177 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 ACY3Q96HD9 319 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 ARPC5LQ9BPX5 153 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 GINS3Q9BRX5 216 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 PSMG3Q9BT73 122 aaPredicted RBP8.08□□□□□ -1.12
VPS33A-204ENST00000540669 NPCDR1Q9BY65 106 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 PEF1Q9UBV8 284 aaKnown RBP8.08□□□□□ -1.12
VPS33A-204ENST00000540669 TIMM9Q9Y5J7 89 aa8.08□□□□□ -1.12
VPS33A-204ENST00000540669 OR2T8A6NH00 312 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 PPP5D1E7EU14 171 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 AGPAT2O15120 278 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 GNG7O60262 68 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 IGHV3-23P01764 117 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 HSPB1P04792 205 aaKnown RBP8.07□□□□□ -1.12
VPS33A-204ENST00000540669 CLEC3BP05452 202 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 LINC00869P0C866 280 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 NUP62P37198 522 aaPredicted RBP8.07□□□□□ -1.12
VPS33A-204ENST00000540669 RPL29P47914 159 aaKnown RBP8.07□□□□□ -1.12
VPS33A-204ENST00000540669 SELENOTP62341 195 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 ZNF90Q03938 601 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 AKR1C1Q04828 323 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 DEFB136Q30KP8 78 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 TIGITQ495A1 244 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 BTNL8Q6UX41 500 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 ZNF600Q6ZNG1 722 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 C8orf86Q6ZUL3 223 aa8.07□□□□□ -1.12
VPS33A-204ENST00000540669 GPHB5Q86YW7 130 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms