RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 CBX5P45973 191 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 FXYD4P59646 89 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 ACTL10Q5JWF8 245 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 HOGA1Q86XE5 327 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 Q8N1X5 172 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 C7orf50Q9BRJ6 194 aaKnown RBP8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 IFT46Q9NQC8 304 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 PRNDQ9UKY0 176 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 HERC1Q15751 4861 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 A0A1W2PS18 150 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 ZNF688P0C7X2 276 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 NPPCP23582 126 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 G6PCP35575 357 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 LPAR6P43657 344 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 TAS2R19P59542 299 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 OXA1LQ15070 435 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 TRIM16LQ309B1 348 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 ZNF600Q6ZNG1 722 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 TMEM229BQ8NBD8 167 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 STXBP6Q8NFX7 210 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 DEDD2Q8WXF8 326 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 MOB3AQ96BX8 217 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 ANAPC10Q9UM13 185 aa8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 PUS1Q9Y606 427 aaKnown RBP eCLIP8.31□□□□□ -1.08
CLSTN3-209ENST00000539982 NAP1L6A6NFF2 107 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 DBX1A6NMT0 343 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 PGLYRP1O75594 196 aaPredicted RBP8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 FCER2P06734 321 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 SPART-AS1P0CW21 52 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 NAT1P18440 290 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 FAUP35544 74 aaKnown RBP8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 NPBWR1P48145 328 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 TMEM17Q86X19 198 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 ZNF114Q8NC26 417 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 PINX1Q96BK5 328 aaKnown RBP8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 RAB40CQ96S21 281 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 C1QTNF4Q9BXJ3 329 aa8.3□□□□□ -1.08
CLSTN3-209ENST00000539982 A0A1B0GU03 582 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 FAM240BA0A1B0GVZ2 78 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 TMEM50AO95807 157 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 RLN1P04808 185 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 AKAIN1P0CW23 69 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 TBPP20226 339 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 RFX2P48378 723 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 NUTF2P61970 127 aaKnown RBP8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 TNP2Q05952 138 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 STEAP1BQ6NZ63 245 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 NRARPQ7Z6K4 114 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 OR5AP2Q8NGF4 316 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 ENKURQ8TC29 256 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 DCANP1Q8TF63 244 aa8.29□□□□□ -1.08
CLSTN3-209ENST00000539982 TMEM189A5PLL7 270 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 RAB3DO95716 219 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 CD3DP04234 171 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 CRYBB3P26998 211 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 HLA-DMAP28067 261 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 BTCP35070 178 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 P2RY1P47900 373 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 TAS2R46P59540 309 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 HERV-K104P61576 105 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 MEF2DQ14814 521 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 RNASE10Q5GAN6 216 aaKnown RBP8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 DHRS11Q6UWP2 260 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 OR4C16Q8NGL9 310 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 METTL26Q96S19 204 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 NEU1Q99519 415 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 SCRT2Q9NQ03 307 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 MCUBQ9NWR8 336 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 XCL2Q9UBD3 114 aa8.28□□□□□ -1.08
CLSTN3-209ENST00000539982 SMIM9A6NGZ8 99 aa8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 M0QYG6 137 aa8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 HRH1P35367 487 aa8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 ERHP84090 104 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 PRCDQ00LT1 54 aa8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 FAAP20Q6NZ36 180 aa8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 ZNF705AQ6ZN79 300 aaPredicted RBP8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 Q6ZNX1 250 aa8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 OR4D10Q8NGI6 311 aa8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 OR5H2Q8NGV7 314 aa8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 COPZ2Q9P299 210 aa8.27□□□□□ -1.09
CLSTN3-209ENST00000539982 DISC1C4P0D8 188 aa8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 PMP2P02689 132 aa8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 EMP1P54849 157 aa8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 FAM3BP58499 235 aaPredicted RBP8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 HSPE1P61604 102 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 DHRS2Q13268 280 aa8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 PSMG4Q5JS54 123 aa8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 CMTM1Q8IZ96 169 aa8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 OR4A16Q8NH70 328 aa8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 NARS2Q96I59 477 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 NACAE9PAV3 2078 aa8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
CLSTN3-209ENST00000539982 TEX48A0A1B0GUV7 120 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 HELTA6NFD8 242 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 ZNF705FA8MVS1 300 aaPredicted RBP8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 H3BMM0 161 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 TCRBP04435 133 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 ZNF705DP0CH99 300 aaPredicted RBP8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 ZNF705BP0CI00 300 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms