RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 IGF2-ASQ6U949 168 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 IGFL3Q6UXB1 125 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 PATE2Q6UY27 113 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 ASCL5Q7RTU5 278 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 FAM19A2Q8N3H0 131 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 NHLRC2Q8NBF2 726 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 NPIPB3Q92617 1050 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 TRGV9Q99603 122 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 TNFRSF19Q9NS68 423 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 WASHC3Q9Y3C0 194 aa10.71□□□□□ -0.69
UBE3B-209ENST00000539584 IGKV1D-37A0A075B6S9 117 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 IGHV2-26A0A0B4J1V2 119 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 CORTO00230 105 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 CA1P00915 261 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-209ENST00000539584 CRYGCP07315 174 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 REG1BP48304 166 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 HBBP68871 147 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 WT1-ASQ06250 92 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 C1orf185Q5T7R7 199 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 LINC00305Q7Z4B0 112 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 C11orf42Q8N5U0 333 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 RND1Q92730 232 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 MLST8Q9BVC4 326 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 SSBP3Q9BWW4 388 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-209ENST00000539584 PRSS22Q9GZN4 317 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 FNDC4Q9H6D8 234 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-209ENST00000539584 COLQQ9Y215 455 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-209ENST00000539584 SIAH2O43255 324 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 PYYP10082 97 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 CD40P25942 277 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 C5orf17Q8NAS9 161 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 OR2D3Q8NGH3 330 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 ASCL3Q9NQ33 180 aa10.7□□□□□ -0.7
UBE3B-209ENST00000539584 TRIOBPQ9H2D6 2365 aa10.69□□□□□ -0.7
UBE3B-209ENST00000539584 TOMM40O96008 361 aa10.69□□□□□ -0.7
UBE3B-209ENST00000539584 OR5AL1P0C617 328 aa10.69□□□□□ -0.7
UBE3B-209ENST00000539584 PLP1P60201 277 aa10.69□□□□□ -0.7
UBE3B-209ENST00000539584 WNT10AQ9GZT5 417 aa10.69□□□□□ -0.7
UBE3B-209ENST00000539584 HEATR1Q9H583 2144 aaKnown RBP10.69□□□□□ -0.7
UBE3B-209ENST00000539584 RPP21Q9H633 154 aaKnown RBP10.69□□□□□ -0.7
UBE3B-209ENST00000539584 DSCAMO60469 2012 aa10.69□□□□□ -0.7
UBE3B-209ENST00000539584 C2orf70A6NJV1 201 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 SLC25A5P05141 298 aaKnown RBP10.68□□□□□ -0.7
UBE3B-209ENST00000539584 COL8A2P25067 703 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 GDF5OSQ5U4N7 250 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 ALKBH2Q6NS38 261 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 TMEM108Q6UXF1 575 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 ST6GALNAC6Q969X2 333 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 TMEM70Q9BUB7 260 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 FAM215AQ9Y5M1 114 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 CGB1A6NKQ9 187 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 LTAP01374 205 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 IGLV2-23P01705 113 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 NBEAP1P0C6P0 100 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 CEACAM8P31997 349 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-209ENST00000539584 TMEM200BQ69YZ2 307 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 PIP4P1Q86T03 277 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 STPG4Q8N801 248 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 TEX45Q8NA69 505 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 TMEM116Q8NCL8 245 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
UBE3B-209ENST00000539584 ZDBF2Q9HCK1 2354 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 PGPA6NDG6 321 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 C17orf100A8MU93 164 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 E7EUB6 86 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 EBLN2Q6P2I7 272 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 ZNF738Q8NE65 137 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 TNFRSF14Q92956 283 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 NDFIP1Q9BT67 221 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 PPIAL4EA0A075B759 164 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 TRAV34A0A0B4J273 112 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 IGHV1-69-2A0A0G2JMI3 117 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 PPIAL4DF5H284 164 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 P01737 135 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 PPIAL4FP0DN26 164 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 LRRC10Q5BKY1 277 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 PRR27Q6MZM9 219 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 RNASEKQ6P5S7 137 aaKnown RBP10.67□□□□□ -0.7
UBE3B-209ENST00000539584 RBPMS2Q6ZRY4 209 aaKnown RBP10.67□□□□□ -0.7
UBE3B-209ENST00000539584 C8orf46Q8TAG6 207 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 DAZAP1Q96EP5 407 aaKnown RBP10.67□□□□□ -0.7
UBE3B-209ENST00000539584 PPIAL4AQ9Y536 164 aa10.67□□□□□ -0.7
UBE3B-209ENST00000539584 INTS1Q8N201 2190 aaKnown RBP10.66□□□□□ -0.7
UBE3B-209ENST00000539584 YLPM1P49750 1951 aaKnown RBP10.66□□□□□ -0.7
UBE3B-209ENST00000539584 TRBV6-1A0A0K0K1D8 114 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 VSTM5A8MXK1 200 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 NDUFB3O43676 98 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 NDUFB8O95169 186 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 TFPI2P48307 235 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 CAMPP49913 170 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 SSBP2P81877 361 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-209ENST00000539584 DEFB109BQ30KR1 87 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 MUC15Q8N387 334 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 RNF24Q9Y225 148 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 DMDP11532 3685 aa10.66□□□□□ -0.7
UBE3B-209ENST00000539584 C22orf46C9J442 243 aa10.65□□□□□ -0.7
UBE3B-209ENST00000539584 NPIPB6E9PJ23 425 aa10.65□□□□□ -0.7
UBE3B-209ENST00000539584 Q56UQ5 140 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms