RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 RBMY1FQ15415 496 aaKnown RBP9.08□□□□□ -0.96
VAMP1-206ENST00000538970 FAAP20Q6NZ36 180 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 PRSS54Q6PEW0 395 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 MIXL1Q9H2W2 232 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 NAA60Q9H7X0 242 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.08□□□□□ -0.96
VAMP1-206ENST00000538970 APLNQ9ULZ1 77 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 U3KQE9 123 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 DNAH6Q9C0G6 4158 aa9.08□□□□□ -0.96
VAMP1-206ENST00000538970 GABARAPH6UMI1 98 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 SMIM18P0DKX4 95 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 RND2P52198 227 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 SSBP1Q04837 148 aaKnown RBP9.07□□□□□ -0.96
VAMP1-206ENST00000538970 MEF2DQ14814 521 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 SURF2Q15527 256 aaPredicted RBP9.07□□□□□ -0.96
VAMP1-206ENST00000538970 C2orf83Q53S99 150 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 SLC24A4Q8NFF2 622 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 OR1S2Q8NGQ3 325 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 RNASEH2CQ8TDP1 164 aaKnown RBP9.07□□□□□ -0.96
VAMP1-206ENST00000538970 GLYATL2Q8WU03 294 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 RBPMSQ93062 196 aaKnown RBP9.07□□□□□ -0.96
VAMP1-206ENST00000538970 RTBDNQ9BSG5 229 aaPredicted RBP9.07□□□□□ -0.96
VAMP1-206ENST00000538970 HEYLQ9NQ87 328 aaPredicted RBP9.07□□□□□ -0.96
VAMP1-206ENST00000538970 CACNG5Q9UF02 275 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 C14orf166Q9Y224 244 aaKnown RBP9.07□□□□□ -0.96
VAMP1-206ENST00000538970 X6R8D5 127 aa9.07□□□□□ -0.96
VAMP1-206ENST00000538970 TEX13DA0A0J9YY54 714 aaPredicted RBP9.06□□□□□ -0.96
VAMP1-206ENST00000538970 HELTA6NFD8 242 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 IGLL5B9A064 214 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 HNRNPCP07910 306 aaKnown RBP eCLIP9.06□□□□□ -0.96
VAMP1-206ENST00000538970 SLC25A4P12235 298 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 OR10J1P30954 320 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 EIF2B2P49770 351 aaKnown RBP9.06□□□□□ -0.96
VAMP1-206ENST00000538970 YPEL3P61236 119 aaPredicted RBP9.06□□□□□ -0.96
VAMP1-206ENST00000538970 MRPS10P82664 201 aaKnown RBP9.06□□□□□ -0.96
VAMP1-206ENST00000538970 DHRS2Q13268 280 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 USF2Q15853 346 aaPredicted RBP9.06□□□□□ -0.96
VAMP1-206ENST00000538970 ACTL10Q5JWF8 245 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 GPR107Q5VW38 600 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 C16orf54Q6UWD8 224 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 SELENOHQ8IZQ5 122 aaKnown RBP9.06□□□□□ -0.96
VAMP1-206ENST00000538970 CSNK1G2-AS1Q8NCQ2 148 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 Q8WTZ3 238 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 TMEM170AQ8WVE7 144 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 GPR146Q96CH1 333 aa9.06□□□□□ -0.96
VAMP1-206ENST00000538970 ELOA3CA0A087WX78 387 aaPredicted RBP9.05□□□□□ -0.96
VAMP1-206ENST00000538970 CRYM-AS1A6NIL9 109 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 HLA-DMBP28068 263 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 DHODHQ02127 395 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 PSMG4Q5JS54 123 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 TMEM268Q5VZI3 342 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 Q6ZTC4 211 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 SMIM4Q8WVI0 70 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 KRTAP4-5Q9BYR2 181 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 CLEC5AQ9NY25 188 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 TBC1D24Q9ULP9 559 aa9.05□□□□□ -0.96
VAMP1-206ENST00000538970 TRAV10A0A0B4J240 114 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 CEBPZOSA8MTT3 80 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 DISC1C4P0D8 188 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 RGS5O15539 181 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 IL4P05112 153 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 NPY1RP25929 384 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 AP2S1P53680 142 aaPredicted RBP9.04□□□□□ -0.96
VAMP1-206ENST00000538970 OR4C16Q8NGL9 310 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 RAB40CQ96S21 281 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 GPR132Q9UNW8 380 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 TMEM56-RWDD3S4R434 201 aa9.04□□□□□ -0.96
VAMP1-206ENST00000538970 FAM90A26D6RGX4 464 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 CTDSP2O14595 271 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 NXPH3O95157 252 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 TOMM40O96008 361 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 AKAIN1P0CW23 69 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 NMSQ5H8A3 153 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 ETFRF1Q6IPR1 90 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 NPIPB3Q92617 1050 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 IL22RA2Q969J5 263 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 ACY3Q96HD9 319 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 PRRT1Q99946 306 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 SEPSECSQ9HD40 501 aaKnown RBP9.03□□□□□ -0.96
VAMP1-206ENST00000538970 NRN1Q9NPD7 142 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 CELA1Q9UNI1 258 aa9.03□□□□□ -0.96
VAMP1-206ENST00000538970 IGHV4-4A0A075B6R2 117 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 CTDSPLO15194 276 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 BUB3O43684 328 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 GSTZ1O43708 216 aaPredicted RBP9.02□□□□□ -0.97
VAMP1-206ENST00000538970 SULT1A3P0DMM9 295 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 SULT1A4P0DMN0 295 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 SNRPD3P62318 126 aaKnown RBP9.02□□□□□ -0.97
VAMP1-206ENST00000538970 SPCS2Q15005 226 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 SIGLEC15Q6ZMC9 328 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 OR51S1Q8NGJ8 323 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 PRR13Q9NZ81 148 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 CACFD1Q9UGQ2 172 aa9.02□□□□□ -0.97
VAMP1-206ENST00000538970 H3BMM0 161 aa9.01□□□□□ -0.97
VAMP1-206ENST00000538970 AMBPP02760 352 aa9.01□□□□□ -0.97
VAMP1-206ENST00000538970 RD3LP0DJH9 198 aa9.01□□□□□ -0.97
VAMP1-206ENST00000538970 PSG1P11464 419 aa9.01□□□□□ -0.97
VAMP1-206ENST00000538970 IL18Q14116 193 aa9.01□□□□□ -0.97
VAMP1-206ENST00000538970 NOXA1Q86UR1 476 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms