RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SSBP1Q04837 148 aaKnown RBP5.69□□□□□ -1.5
MSH6-209ENST00000538136 CD69Q07108 199 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 SURF2Q15527 256 aaPredicted RBP5.69□□□□□ -1.5
MSH6-209ENST00000538136 ETFRF1Q6IPR1 90 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 TCF24Q7RTU0 167 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 GTSCR1Q86UQ5 136 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 KRTAP1-3Q8IUG1 177 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 CFHR4Q92496 578 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 BSCL2Q96G97 398 aaPredicted RBP5.69□□□□□ -1.5
MSH6-209ENST00000538136 FAM110AQ9BQ89 295 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 ZFP57Q9NU63 452 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 XCL2Q9UBD3 114 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 FBLN5Q9UBX5 448 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 U3KQ87 197 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 CTDSPLO15194 276 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 PSG1P11464 419 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 FOSL1P15407 271 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 CSN1S1P47710 185 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 DLX6P56179 175 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 SUMO1P63165 101 aaKnown RBP5.68□□□□□ -1.5
MSH6-209ENST00000538136 C10orf113Q5VZT2 155 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 ZNF660Q6AZW8 331 aaPredicted RBP5.68□□□□□ -1.5
MSH6-209ENST00000538136 EIF5AL1Q6IS14 154 aaKnown RBP5.68□□□□□ -1.5
MSH6-209ENST00000538136 ZNF486Q96H40 463 aaPredicted RBP5.68□□□□□ -1.5
MSH6-209ENST00000538136 WFDC10AQ9H1F0 79 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 BMPR1BO00238 502 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 GGCTO75223 188 aaKnown RBP5.68□□□□□ -1.5
MSH6-209ENST00000538136 ZP3P21754 424 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 CD81P60033 236 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 ZNF833PQ6ZTB9 187 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 KCNRGQ8N5I3 272 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 NECAP1Q8NC96 275 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 DEDD2Q8WXF8 326 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 SLC2A8Q9NY64 477 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 BPIFB3P59826 476 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 ODF3L1Q8IXM7 274 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.68□□□□□ -1.5
MSH6-209ENST00000538136 DLX4Q92988 240 aaPredicted RBP5.68□□□□□ -1.5
MSH6-209ENST00000538136 AJUBAQ96IF1 538 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 CXorf58Q96LI9 332 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 TSSC4Q9Y5U2 329 aaPredicted RBP5.68□□□□□ -1.5
MSH6-209ENST00000538136 PXMP4Q9Y6I8 212 aa5.68□□□□□ -1.5
MSH6-209ENST00000538136 OOSP1A8MZH6 123 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 TSPAN9O75954 239 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 PYYP10082 97 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 PPT1P50897 306 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 OR10G4Q8NGN3 311 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 OR10G9Q8NGN4 311 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 OR10G7Q8NGN6 311 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 NPVFQ9HCQ7 196 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 HIGD1AQ9Y241 93 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 PIGBOS1A0A0B4J2F0 54 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 A6NDX4 124 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 F6UB75 175 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 SSBP2P81877 361 aaPredicted RBP5.67□□□□□ -1.5
MSH6-209ENST00000538136 ZNF266Q14584 549 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 PRSS54Q6PEW0 395 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 LINC00305Q7Z4B0 112 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 LYPD6Q86Y78 171 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 TMEM167AQ8TBQ9 72 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 MARVELD1Q9BSK0 173 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 SH3BGRL3Q9H299 93 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 AAMDCQ9H7C9 122 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 IGLV2-23P01705 113 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 EIF5AP63241 154 aaKnown RBP5.67□□□□□ -1.5
MSH6-209ENST00000538136 OPCMLQ14982 345 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 SCRT1Q9BWW7 348 aa5.67□□□□□ -1.5
MSH6-209ENST00000538136 IGSF23A1L1A6 192 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 LINC01619G3V211 115 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 EDN2P20800 178 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 CFHR3Q02985 330 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 OR5I1Q13606 314 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 OXA1LQ15070 435 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 EBLN2Q6P2I7 272 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 ZNF767PQ75MW2 155 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 SGMS2Q8NHU3 365 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 RXFP4Q8TDU9 374 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 TMPRSS5Q9H3S3 457 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 TRAV34A0A0B4J273 112 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 KNCNA6PVL3 124 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 FOXI3A8MTJ6 420 aaPredicted RBP5.66□□□□□ -1.5
MSH6-209ENST00000538136 H2AFB1P0C5Y9 115 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 FOLR2P14207 255 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 PTBP1P26599 531 aaKnown RBP eCLIP5.66□□□□□ -1.5
MSH6-209ENST00000538136 ZNF124Q15973 351 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 A8MXK9 166 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 C9JCJ5 164 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 M0R3E3 92 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 TPT1P13693 172 aaKnown RBP5.66□□□□□ -1.5
MSH6-209ENST00000538136 S100A11P31949 105 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 UBE2G1P62253 170 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 PRCDQ00LT1 54 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 ICAM4Q14773 271 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 UNQ9165/PRO28630Q6UXU0 137 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 STHQ8IWL8 128 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 RNF182Q8N6D2 247 aa5.66□□□□□ -1.5
MSH6-209ENST00000538136 NXF2Q9GZY0 626 aaKnown RBP5.66□□□□□ -1.5
MSH6-209ENST00000538136 OR11H12B2RN74 326 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 CFPP27918 469 aa5.65□□□□□ -1.5
MSH6-209ENST00000538136 BTCP35070 178 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms