RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 C2orf83Q53S99 150 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 PYDC2Q56P42 97 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 PRSS54Q6PEW0 395 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 STXBP6Q8NFX7 210 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 IL22RA2Q969J5 263 aa10.52□□□□□ -0.73
RTN3P1-201ENST00000536295 IGLC1P0CG04 106 aa10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 NPY1RP25929 384 aa10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 CRYBB3P26998 211 aa10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 OR10J1P30954 320 aa10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 P2RY1P47900 373 aa10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 SUPT4H1P63272 117 aaKnown RBP10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 RBMS2Q15434 407 aaKnown RBP10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 LYZL2Q7Z4W2 148 aa10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 OR1S2Q8NGQ3 325 aa10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 RNASEH2CQ8TDP1 164 aaKnown RBP10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 TMEM170AQ8WVE7 144 aa10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 NARS2Q96I59 477 aaKnown RBP10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 ALMS1Q8TCU4 4167 aa10.51□□□□□ -0.73
RTN3P1-201ENST00000536295 EPPK1P58107 5090 aaKnown RBP10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 A0A0B4J2A0 478 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 CA1P00915 261 aaPredicted RBP10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 IFNA10P01566 189 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 SLC25A4P12235 298 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 ANXA3P12429 323 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 CCR6P51684 374 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 SMCO1Q147U7 214 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 NMSQ5H8A3 153 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 TMED4Q7Z7H5 227 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 Q8WTZ3 238 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 NPIPB3Q92617 1050 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 ACY3Q96HD9 319 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 RBKSQ9H477 322 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 SHPKQ9UHJ6 478 aa10.5□□□□□ -0.73
RTN3P1-201ENST00000536295 TRAV2A0A0B4J234 112 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 FAUP35544 74 aaKnown RBP10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 KLF9Q13886 244 aaPredicted RBP10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 ETFRF1Q6IPR1 90 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 LGI3Q8N145 548 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 TOMM5Q8N4H5 51 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 TMEM217Q8N7C4 229 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 OR1S1Q8NH92 325 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 DTD1Q8TEA8 209 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 GRAMD2BQ96HH9 432 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 RARRES2Q99969 163 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 CACFD1Q9UGQ2 172 aa10.49□□□□□ -0.73
RTN3P1-201ENST00000536295 NUPR2A6NF83 97 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 K7EQG2 157 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 IL4P05112 153 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 HNRNPCP07910 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 ZNF688P0C7X2 276 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 AP3S2P59780 193 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 YPEL3P61236 119 aaPredicted RBP10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 SRPXP78539 464 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 NOXA1Q86UR1 476 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 STHQ8IWL8 128 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 OR11H2Q8NH07 326 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 GATAD1Q8WUU5 269 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 TRIM63Q969Q1 353 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 HSPB7Q9UBY9 170 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 V9GYH0 126 aa10.48□□□□□ -0.73
RTN3P1-201ENST00000536295 IFNA4P05014 189 aa10.47□□□□□ -0.73
RTN3P1-201ENST00000536295 VAMP1P23763 118 aa10.47□□□□□ -0.73
RTN3P1-201ENST00000536295 S100A5P33763 92 aa10.47□□□□□ -0.73
RTN3P1-201ENST00000536295 USF2Q15853 346 aaPredicted RBP10.47□□□□□ -0.73
RTN3P1-201ENST00000536295 CEMP1Q6PRD7 247 aaPredicted RBP10.47□□□□□ -0.73
RTN3P1-201ENST00000536295 U3KQ87 197 aa10.47□□□□□ -0.73
RTN3P1-201ENST00000536295 KNCNA6PVL3 124 aa10.46□□□□□ -0.73
RTN3P1-201ENST00000536295 LY6G6CO95867 125 aa10.46□□□□□ -0.73
RTN3P1-201ENST00000536295 RD3LP0DJH9 198 aa10.46□□□□□ -0.73
RTN3P1-201ENST00000536295 EIF2B2P49770 351 aaKnown RBP10.46□□□□□ -0.73
RTN3P1-201ENST00000536295 DHRS2Q13268 280 aa10.46□□□□□ -0.73
RTN3P1-201ENST00000536295 ZNF79Q15937 498 aa10.46□□□□□ -0.73
RTN3P1-201ENST00000536295 C16orf54Q6UWD8 224 aa10.46□□□□□ -0.73
RTN3P1-201ENST00000536295 DCANP1Q8TF63 244 aa10.46□□□□□ -0.73
RTN3P1-201ENST00000536295 U3KQE9 123 aa10.46□□□□□ -0.73
RTN3P1-201ENST00000536295 HELTA6NFD8 242 aa10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 DEFB4AO15263 64 aa10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 TOMM40O96008 361 aa10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 IAPPP10997 89 aa10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 PSG1P11464 419 aa10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 ATF4P18848 351 aaPredicted RBP10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 TMEM128Q5BJH2 165 aa10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 OR51G1Q8NGK1 321 aa10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 GLMPQ8WWB7 406 aa10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 LINC00476Q8WZB0 136 aa10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 PAIP2BQ9ULR5 123 aaKnown RBP10.45□□□□□ -0.74
RTN3P1-201ENST00000536295 ZFP92A6NM28 416 aa10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 NANOS2P60321 138 aaKnown RBP10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 PSMG4Q5JS54 123 aa10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 ACTL10Q5JWF8 245 aa10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 CCDC190Q86UF4 302 aa10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 PHLDA1Q8WV24 401 aaPredicted RBP10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 SLC35E1Q96K37 410 aa10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 PBDC1Q9BVG4 233 aa10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 FBXL17Q9UF56 701 aa10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 KLK5Q9Y337 293 aaPredicted RBP10.44□□□□□ -0.74
RTN3P1-201ENST00000536295 BIRC6Q9NR09 4857 aa10.43□□□□□ -0.74
RTN3P1-201ENST00000536295 PIGBOS1A0A0B4J2F0 54 aa10.43□□□□□ -0.74
RTN3P1-201ENST00000536295 DUXBA0A1W2PPF3 345 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms